RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 IMPACTQ9P2X3 320 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 PCSK1NQ9UHG2 260 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 VPS28Q9UK41 221 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 INTS6Q9UL03 887 aaKnown RBP21.06■□□□□ 0.96
VARS-224ENST00000479051 AP4E1Q9UPM8 1137 aa21.06■□□□□ 0.96
VARS-224ENST00000479051 A0A1W2PQF6 199 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 WASH3PC4AMC7 463 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 PROB1E7EW31 1015 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 LRIG2O94898 1065 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 MZF1P28698 734 aaPredicted RBP21.05■□□□□ 0.96
VARS-224ENST00000479051 MIPP30301 263 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 HTR7P34969 479 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 CYLC1P35663 651 aaPredicted RBP21.05■□□□□ 0.96
VARS-224ENST00000479051 PLA2G5P39877 138 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 KRT83P78385 493 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 USP39Q53GS9 565 aaKnown RBP21.05■□□□□ 0.96
VARS-224ENST00000479051 ERMARDQ5T6L9 678 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 MANEALQ5VSG8 457 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.05■□□□□ 0.96
VARS-224ENST00000479051 PSTKQ8IV42 348 aaKnown RBP21.05■□□□□ 0.96
VARS-224ENST00000479051 APCDD1Q8J025 514 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 NIPA2Q8N8Q9 360 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 MDGA1Q8NFP4 955 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 NKD2Q969F2 451 aaPredicted RBP21.05■□□□□ 0.96
VARS-224ENST00000479051 FEM1AQ9BSK4 669 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 DONSONQ9NYP3 566 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 SUN2Q9UH99 717 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 SLC25A13Q9UJS0 675 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 RAB23Q9ULC3 237 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 USP18Q9UMW8 372 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 ERVW-1Q9UQF0 538 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 RAD54BQ9Y620 910 aa21.05■□□□□ 0.96
VARS-224ENST00000479051 CREB3O43889 395 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 LRCH4O75427 683 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 PRKCHP24723 683 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 ETFBP38117 255 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 MAPKAPK2P49137 400 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 BYSLQ13895 437 aaKnown RBP21.04■□□□□ 0.96
VARS-224ENST00000479051 SPA17Q15506 151 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 PTPRNQ16849 979 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 TMTC1Q8IUR5 882 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 C2orf49Q9BVC5 232 aaPredicted RBP21.04■□□□□ 0.96
VARS-224ENST00000479051 PACSIN1Q9BY11 444 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 TMEM245Q9H330 911 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 CATSPERBQ9H7T0 1116 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 FBRSQ9HAH7 460 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 INTUQ9ULD6 942 aa21.04■□□□□ 0.96
VARS-224ENST00000479051 ILVBLA1L0T0 632 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 FAM72CH0Y354 149 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 RPP40O75818 363 aaKnown RBP21.03■□□□□ 0.96
VARS-224ENST00000479051 IPO7O95373 1038 aaKnown RBP21.03■□□□□ 0.96
VARS-224ENST00000479051 EPHB2P29323 1055 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 ZNF135P52742 658 aaPredicted RBP21.03■□□□□ 0.96
VARS-224ENST00000479051 TPI1P60174 286 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 BOLA3Q53S33 107 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 FAM72AQ5TYM5 149 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 FAM72DQ6L9T8 149 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 KIAA1211LQ6NV74 962 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 CEP68Q76N32 757 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 C11orf74Q86VG3 221 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 FAM72BQ86X60 149 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 RHOT2Q8IXI1 618 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 PYROXD2Q8N2H3 581 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 ARFGAP1Q8N6T3 406 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 GAB3Q8WWW8 586 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 SPACA7Q96KW9 195 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 SNRNP25Q9BV90 132 aaKnown RBP21.03■□□□□ 0.96
VARS-224ENST00000479051 TPSD1Q9BZJ3 242 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 DHX35Q9H5Z1 703 aaKnown RBP21.03■□□□□ 0.96
VARS-224ENST00000479051 TMEM248Q9NWD8 314 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 FANCMQ8IYD8 2048 aa21.03■□□□□ 0.96
VARS-224ENST00000479051 FGF10O15520 208 aaPredicted RBP21.02■□□□□ 0.96
VARS-224ENST00000479051 LMNAP02545 664 aaKnown RBP21.02■□□□□ 0.96
VARS-224ENST00000479051 GABRG2P18507 467 aa21.02■□□□□ 0.96
VARS-224ENST00000479051 HOXC13P31276 330 aa21.02■□□□□ 0.96
VARS-224ENST00000479051 SSR1P43307 286 aaKnown RBP21.02■□□□□ 0.96
VARS-224ENST00000479051 SIM2Q14190 667 aaPredicted RBP21.02■□□□□ 0.96
VARS-224ENST00000479051 ALG14Q96F25 216 aa21.02■□□□□ 0.96
VARS-224ENST00000479051 BTBD6Q96KE9 485 aa21.02■□□□□ 0.96
VARS-224ENST00000479051 PEBP4Q96S96 227 aa21.02■□□□□ 0.96
VARS-224ENST00000479051 EPC1Q9H2F5 836 aa21.02■□□□□ 0.96
VARS-224ENST00000479051 DOCK4Q8N1I0 1966 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 HLA-EP13747 358 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 CTSOP43234 321 aaPredicted RBP21.01■□□□□ 0.95
VARS-224ENST00000479051 MAGEA1P43355 309 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 GNA12Q03113 381 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 CAMK2GQ13555 558 aaPredicted RBP21.01■□□□□ 0.95
VARS-224ENST00000479051 HADHQ16836 314 aaKnown RBP21.01■□□□□ 0.95
VARS-224ENST00000479051 PRR23BQ6ZRT6 265 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 NLRP14Q86W24 1093 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 DCAF4L2Q8NA75 395 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 SPC24Q8NBT2 197 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 OR52K2Q8NGK3 314 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 OR2T3Q8NH03 318 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 RFFLQ8WZ73 363 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 ERLEC1Q96DZ1 483 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 MRGPRX3Q96LB0 322 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 SPON2Q9BUD6 331 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 MAGEB5Q9BZ81 275 aa21.01■□□□□ 0.95
VARS-224ENST00000479051 GPATCH2LQ9NWQ4 482 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms