RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 MED7O43513 233 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 IL1BP01584 269 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 TBC1D3HP0C7X1 549 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 VAV1P15498 845 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 PDGFRAP16234 1089 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 C5AR1P21730 350 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 MZF1P28698 734 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 CCR5P51681 352 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 ADPRHP54922 357 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 ELAVL3Q14576 367 aaKnown RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 SOWAHCQ53LP3 525 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 TBC1D3GQ6DHY5 549 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 TBC1D3CQ6IPX1 549 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 TMPRSS12Q86WS5 348 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 CIR1Q86X95 450 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 TRIM59Q8IWR1 403 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 TBC1D3Q8IZP1 549 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 ATP6V0D2Q8N8Y2 350 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 STK32AQ8WU08 396 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 ZNF606Q8WXB4 792 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 LRIG1Q96JA1 1093 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 SERAC1Q96JX3 654 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 CNDP2Q96KP4 475 aaKnown RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 MED15Q96RN5 788 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 SLC4A5Q9BY07 1137 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 UBE2TQ9NPD8 197 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 SCUBE2Q9NQ36 999 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 GDF3Q9NR23 364 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 SLC12A6Q9UHW9 1150 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 CYTH4Q9UIA0 394 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 CNTN6Q9UQ52 1028 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 FASNP49327 2511 aaKnown RBP12.13□□□□□ -0.47
CPSF7-211ENST00000477890 NBEAQ8NFP9 2946 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 KNTC1P50748 2209 aa12.13□□□□□ -0.47
CPSF7-211ENST00000477890 DOCK9Q9BZ29 2069 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 ITPR1Q14643 2758 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 SYNJ2BP-COX16A0A087WUM0 186 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 A0A1W2PR77 199 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 KCNU1A8MYU2 1149 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 PLK4O00444 970 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 YKT6O15498 198 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 THAP12O43422 761 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 LDOC1O95751 146 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 GNA14O95837 355 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 IGLV3-25P01717 112 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 AFPP02771 609 aaKnown RBP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 BMP6P22004 513 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 ARRB1P49407 418 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 STX17P56962 302 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 PPP2CBP62714 309 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 YWHAZP63104 245 aaKnown RBP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 PPP2CAP67775 309 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 SULT2A1Q06520 285 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 DNAJC3Q13217 504 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 SLC12A1Q13621 1099 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 SHBQ15464 509 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 SLC45A4Q5BKX6 768 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 TMEM110Q86TL2 294 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 CCAR2Q8N163 923 aaKnown RBP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 EID2Q8N6I1 236 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 SAP25Q8TEE9 199 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 THAP9Q9H5L6 903 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 FAM204AQ9H8W3 233 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 ACP6Q9NPH0 428 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 COX16Q9P0S2 106 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 TPX2Q9ULW0 747 aaKnown RBP12.12□□□□□ -0.47
CPSF7-211ENST00000477890 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
CPSF7-211ENST00000477890 LAMA5O15230 3695 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 A0A1B0GVM2 712 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 TCAF2A6NFQ2 919 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 C10orf142B7Z368 130 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 TLR4O00206 839 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 BIN1O00499 593 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 RFPL3O75679 317 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 JUPP14923 745 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 EPHA8P29322 1005 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-211ENST00000477890 GNA15P30679 374 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 DRD3P35462 400 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 HNF1BP35680 557 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 METAP1P53582 386 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 MARSP56192 900 aaKnown RBP12.11□□□□□ -0.47
CPSF7-211ENST00000477890 CLDN6P56747 220 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 NXPH1P58417 271 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 PDCLQ13371 301 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 TAF5Q15542 800 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 MEA1Q16626 185 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 RABGAP1LQ5R372 815 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 TTC39BQ5VTQ0 682 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-211ENST00000477890 FOXR2Q6PJQ5 311 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 ELOA2Q8IYF1 753 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-211ENST00000477890 RNF34Q969K3 372 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 DCBLD2Q96PD2 775 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 SPAG5Q96R06 1193 aa12.11□□□□□ -0.47
CPSF7-211ENST00000477890 PRMT1Q99873 361 aaKnown RBP12.11□□□□□ -0.47
CPSF7-211ENST00000477890 SRRTQ9BXP5 876 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms