RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 KDELC1Q6UW63 502 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 GAREM2Q75VX8 874 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 GSTA5Q7RTV2 222 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 HERC6Q8IVU3 1022 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 FBXO36Q8NEA4 188 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 FBXO32Q969P5 355 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 SLC22A12Q96S37 553 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 SSU72Q9NP77 194 aaKnown RBP12.43□□□□□ -0.42
PRPF39-203ENST00000477626 DNAJC17Q9NVM6 304 aaKnown RBP12.43□□□□□ -0.42
PRPF39-203ENST00000477626 GRID1Q9ULK0 1009 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 C2orf71A6NGG8 1288 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 CAPN9O14815 690 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 MATN3O15232 486 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 UPP2O95045 317 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 TUFMP49411 452 aaKnown RBP12.43□□□□□ -0.42
PRPF39-203ENST00000477626 KCNQ1P51787 676 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 TBX4P57082 545 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 ERVFC1P60507 584 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 STAT4Q14765 748 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 CXorf57Q6NSI4 855 aaKnown RBP12.43□□□□□ -0.42
PRPF39-203ENST00000477626 BZW1Q7L1Q6 419 aaKnown RBP12.43□□□□□ -0.42
PRPF39-203ENST00000477626 TRABD2AQ86V40 505 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 SCN4BQ8IWT1 228 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 AUTS2Q8WXX7 1259 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 EPAS1Q99814 870 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 SAYSD1Q9NPB0 183 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 RAB6BQ9NRW1 208 aa12.43□□□□□ -0.42
PRPF39-203ENST00000477626 GOLGA6CA6NDK9 693 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ACSL3O95573 720 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 LATS1O95835 1130 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 GSTA2P09210 222 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 MYZAPP0CAP1 466 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 GOLGA6DP0CG33 693 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PSMB4P28070 264 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ELK3P41970 407 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PPP3CCP48454 512 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 OLIG2Q13516 323 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 C6orf118Q5T5N4 469 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 UNC5AQ6ZN44 842 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 TMEM135Q86UB9 458 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 RIBC1Q8N443 379 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PDZD8Q8NEN9 1154 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 GIPC2Q8TF65 315 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 SPOCK2Q92563 424 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 KLHL5Q96PQ7 755 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ACE2Q9BYF1 805 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ACBD3Q9H3P7 528 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 GOLGA6AQ9NYA3 693 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ZCWPW2A0A1B0GU75 182 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 GOLGA6L7A0A1B0GV03 622 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 CXorf49A8MYA2 514 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-203ENST00000477626 H7C0C1 242 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ATP5OP48047 213 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PPIGQ13427 754 aaKnown RBP eCLIP12.42□□□□□ -0.423e-9■■■■□ 25.1
PRPF39-203ENST00000477626 VPS52Q8N1B4 723 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 LZTR1Q8N653 840 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PLD4Q96BZ4 506 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 XPO6Q96QU8 1125 aaKnown RBP12.42□□□□□ -0.42
PRPF39-203ENST00000477626 VAT1Q99536 393 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 EBNA1BP2Q99848 306 aaKnown RBP12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ARNT2Q9HBZ2 717 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 SLC24A2Q9UI40 661 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 TBC1D30Q9Y2I9 924 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PRUNE2Q8WUY3 3088 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PPP1R12AO14974 1030 aaPredicted RBP12.42□□□□□ -0.42
PRPF39-203ENST00000477626 TLR5O60602 858 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PRKCGP05129 697 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 CPB1P15086 417 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 NR1D1P20393 614 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 SSTR1P30872 391 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 FPGSQ05932 587 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PDIA2Q13087 525 aaKnown RBP12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PRSS36Q5K4E3 855 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ARMC3Q5W041 872 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 KCTD16Q68DU8 428 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 CEP128Q6ZU80 1094 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 CENPUQ71F23 418 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 KLHL23Q8NBE8 558 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 ARRDC2Q8TBH0 407 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 FCRL5Q96RD9 977 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 PPCSQ9HAB8 311 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 MARCH2Q9P0N8 246 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 TRHDEQ9UKU6 1024 aa12.42□□□□□ -0.42
PRPF39-203ENST00000477626 SYNJ2BP-COX16A0A087WUM0 186 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 A0A087WUV0 522 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 PRPF4O43172 522 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 SIN3BO75182 1162 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 GSRP00390 522 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 SLC2A3P11169 496 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 ARNTP27540 789 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 PPM1AP35813 382 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 ARL4CP56559 192 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 SLC14A2Q15849 920 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 COL13A1Q5TAT6 717 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 FAXCQ5TGI0 409 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 LRRC49Q8IUZ0 686 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 ZBED8Q8IZ13 594 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 SPPL3Q8TCT6 385 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 FCRL3Q96P31 734 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms