RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
PTPN7-210ENST00000477625 TBC1D30Q9Y2I9 924 aa12.61□□□□□ -0.39
PTPN7-210ENST00000477625 A0A1B0GTH6 734 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 A0A1W2PQC6 194 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 TARSL2A2RTX5 802 aaKnown RBP12.6□□□□□ -0.39
PTPN7-210ENST00000477625 TTC34A8MYJ7 566 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 SIN3BO75182 1162 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 DNTTP04053 509 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 CALB1P05937 261 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 KRT3P12035 628 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 NNMTP40261 264 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 GSCP56915 257 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-210ENST00000477625 ATP11AP98196 1134 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 NR1I3Q14994 352 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 DUOXA1Q1HG43 343 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 CCDC14Q49A88 953 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 WDR45BQ5MNZ6 344 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 C9orf64Q5T6V5 341 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 ZNF776Q68DI1 518 aaPredicted RBP12.6□□□□□ -0.39
PTPN7-210ENST00000477625 LRRC31Q6UY01 552 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 RABEPKQ7Z6M1 372 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 ZNF683Q8IZ20 524 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 RGL4Q8IZJ4 473 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 OR52K2Q8NGK3 314 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 BAP1Q92560 729 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 ALG14Q96F25 216 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 RPL10LQ96L21 214 aaKnown RBP12.6□□□□□ -0.39
PTPN7-210ENST00000477625 TMPRSS4Q9NRS4 437 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 SLC6A14Q9UN76 642 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 OR51B4Q9Y5P0 310 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 SNX10Q9Y5X0 201 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 ITIH6Q6UXX5 1313 aa12.6□□□□□ -0.39
PTPN7-210ENST00000477625 ATXN2Q99700 1313 aaKnown RBP12.6□□□□□ -0.39
PTPN7-210ENST00000477625 LAMA1P25391 3075 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 MUC22E2RYF6 1773 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 IGLV3-10A0A075B6K4 115 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 C2CD4BA6NLJ0 364 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 C4orf47A7E2U8 309 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 METTL12A8MUP2 240 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 E9PAM4 449 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 CDX4O14627 284 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 RNASEH1O60930 286 aaKnown RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 CNTN5O94779 1100 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 SERPINC1P01008 464 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 CFIP05156 583 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 SERPINF2P08697 491 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 SDC4P31431 198 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 RFC1P35251 1148 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 STK19P49842 368 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 VASPP50552 380 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 C1QBPQ07021 282 aaKnown RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 ALFQ53S48 1182 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 MON1BQ7L1V2 547 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 FAM124AQ86V42 546 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 FAM131BQ86XD5 332 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 JOSD2Q8TAC2 188 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 DNASE2BQ8WZ79 361 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 CENPIQ92674 756 aaPredicted RBP12.59□□□□□ -0.39
PTPN7-210ENST00000477625 PTPRN2Q92932 1015 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 FAM129BQ96TA1 746 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 SELENOOQ9BVL4 669 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 PCED1AQ9H1Q7 454 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 CBX8Q9HC52 389 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 TMEM9BQ9NQ34 198 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 VPS28Q9UK41 221 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 SCML1Q9UN30 329 aa12.59□□□□□ -0.39
PTPN7-210ENST00000477625 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
PTPN7-210ENST00000477625 MED19A0JLT2 244 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-210ENST00000477625 LRRC53A6NM62 1247 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 SIGLEC16A6NMB1 481 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 MEI4A8MW99 385 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 SRGAP2O75044 1071 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 GJB6O95452 261 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 GNSP15586 552 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 ENGP17813 658 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 TNFAIP3P21580 790 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 MAOBP27338 520 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 ACSL1P33121 698 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 ADRA1BP35368 520 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 PTPN9P43378 593 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 NUMBP49757 651 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 TPM4P67936 248 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 GFPT1Q06210 699 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-210ENST00000477625 SFSWAPQ12872 951 aaKnown RBP12.58□□□□□ -0.4
PTPN7-210ENST00000477625 CDO1Q16878 200 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 C15orf59Q2T9L4 293 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-210ENST00000477625 ARL13BQ3SXY8 428 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 TTC31Q49AM3 519 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-210ENST00000477625 ARTNQ5T4W7 220 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 SH3PXD2AQ5TCZ1 1133 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 DCAF12L1Q5VU92 463 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 DAB2IPQ5VWQ8 1189 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 ACAD10Q6JQN1 1059 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 WDR59Q6PJI9 974 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 LRSAM1Q6UWE0 723 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 USP30Q70CQ3 517 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 STRADAQ7RTN6 431 aa12.58□□□□□ -0.4
PTPN7-210ENST00000477625 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.4
PTPN7-210ENST00000477625 LUZP1Q86V48 1076 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms