RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 CD68P34810 354 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-206ENST00000477085 PAPOLAP51003 745 aaKnown RBP14.82□□□□□ -0.04
COL4A6-206ENST00000477085 KYNUQ16719 465 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 SPDYCQ5MJ68 293 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 POTEHQ6S545 545 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 CCDC13Q8IYE1 715 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 AGGF1Q8N302 714 aaeCLIP14.82□□□□□ -0.04
COL4A6-206ENST00000477085 AZIN2Q96A70 460 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 SAMD11Q96NU1 681 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 RPRD1AQ96P16 312 aaPredicted RBP14.82□□□□□ -0.04
COL4A6-206ENST00000477085 SH3GL2Q99962 352 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 SLC46A2Q9BY10 475 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 BRD8Q9H0E9 1235 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 ATXN3LQ9H3M9 355 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 OGFRQ9NZT2 677 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 CPQQ9Y646 472 aa14.82□□□□□ -0.04
COL4A6-206ENST00000477085 ZBTB24O43167 697 aaPredicted RBP14.81□□□□□ -0.04
COL4A6-206ENST00000477085 AVILO75366 819 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 ACTN2P35609 894 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 SLC11A2P49281 568 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 EPHA5P54756 1037 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 RPS24P62847 133 aaKnown RBP14.81□□□□□ -0.04
COL4A6-206ENST00000477085 SMAD3P84022 425 aaKnown RBP14.81□□□□□ -0.04
COL4A6-206ENST00000477085 CNTD1Q8N815 330 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 OR52K2Q8NGK3 314 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 UHMK1Q8TAS1 419 aaKnown RBP14.81□□□□□ -0.04
COL4A6-206ENST00000477085 SHKBP1Q8TBC3 707 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 C9orf72Q96LT7 481 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 FOXP3Q9BZS1 431 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 NINJ2Q9NZG7 142 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 STOML2Q9UJZ1 356 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 HCFC2Q9Y5Z7 792 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 ZFP37Q9Y6Q3 630 aaPredicted RBP14.81□□□□□ -0.04
COL4A6-206ENST00000477085 MYO7AQ13402 2215 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 CEP290O15078 2479 aa14.81□□□□□ -0.04
COL4A6-206ENST00000477085 F5H5T6 163 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ALOX15BO15296 676 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 LPXNO60711 386 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 OPHN1O60890 802 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 PEX11BO96011 259 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 C1RP00736 705 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 JCHAINP01591 159 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 APRTP07741 180 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 CCNCP24863 283 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 GRIA1P42261 906 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 MAGEA4P43358 317 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 NTHL1P78549 312 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ZNF844Q08AG5 666 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 SLC5A9Q2M3M2 681 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 TEX44Q53QW1 395 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ACBD5Q5T8D3 534 aaPredicted RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ZNF697Q5TEC3 545 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 Q6ZNB5 142 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ARHGEF18Q6ZSZ5 1173 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ZNF534Q76KX8 674 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 TRMT10CQ7L0Y3 403 aaKnown RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 PID1Q7Z2X4 250 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 CAND1Q86VP6 1230 aaKnown RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ARNTL2Q8WYA1 636 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 MRPS31Q92665 395 aaKnown RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 HMCESQ96FZ2 354 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 TSPYL1Q9H0U9 437 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 SMG9Q9H0W8 520 aaKnown RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 SAYSD1Q9NPB0 183 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ASAH2Q9NR71 780 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 NUP205Q92621 2012 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 E7ESA3 106 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 GFRA2O00451 464 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 TSPAN3O60637 253 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 TTC4O95801 387 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 NUDT17P0C025 328 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 PSMB4P28070 264 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 NDST2P52849 883 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 SLC7A9P82251 487 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ZNF33AQ06730 810 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 MTA1Q13330 715 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 HIF1AQ16665 826 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ADGRF1Q5T601 910 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 PDE12Q6L8Q7 609 aaKnown RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 LRIG3Q6UXM1 1119 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 C4orf22Q6V702 233 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 RTL10Q7L3V2 364 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 IGDCC3Q8IVU1 814 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ELMOD1Q8N336 334 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ARL8AQ96BM9 186 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 ZNF707Q96C28 371 aaPredicted RBP14.8□□□□□ -0.04
COL4A6-206ENST00000477085 AGAP3Q96P47 875 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 IGSF9Q9P2J2 1179 aa14.8□□□□□ -0.04
COL4A6-206ENST00000477085 NYNRINQ9P2P1 1898 aaKnown RBP14.79□□□□□ -0.04
COL4A6-206ENST00000477085 RASA4BC9J798 803 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 J3KR12 359 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 RFXAPO00287 272 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 RASA4O43374 803 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 ACSL3O95573 720 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 RHOP08100 348 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 CDC25CP30307 473 aa14.79□□□□□ -0.04
COL4A6-206ENST00000477085 HOXA9P31269 272 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms