RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 PRMT1Q99873 361 aaKnown RBP12.04□□□□□ -0.48
VARS2-208ENST00000477052 THAP9Q9H5L6 903 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 CAAP1Q9H8G2 361 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 FBRSQ9HAH7 460 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 AASDHPPTQ9NRN7 309 aa12.04□□□□□ -0.48
VARS2-208ENST00000477052 A0A1W2PPC4 97 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 FLRT2O43155 660 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 BNIP3LO60238 219 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 RTN2O75298 545 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 MOCS3O95396 460 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 SRPRAP08240 638 aaKnown RBP12.03□□□□□ -0.48
VARS2-208ENST00000477052 C7P10643 843 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 TFE3P19532 575 aaPredicted RBP12.03□□□□□ -0.48
VARS2-208ENST00000477052 MAT2AP31153 395 aaKnown RBP12.03□□□□□ -0.48
VARS2-208ENST00000477052 C21orf59P57076 290 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 CDK17Q00537 523 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 EIF4EBP2Q13542 120 aaPredicted RBP12.03□□□□□ -0.48
VARS2-208ENST00000477052 SHBQ15464 509 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 OR6B2Q6IFH4 312 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 CXorf57Q6NSI4 855 aaKnown RBP12.03□□□□□ -0.48
VARS2-208ENST00000477052 FBXL22Q6P050 247 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 USP30Q70CQ3 517 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 PROSER1Q86XN7 944 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 ATP6V0D2Q8N8Y2 350 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 PPP1R13BQ96KQ4 1090 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 SIX2Q9NPC8 291 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 TMPRSS4Q9NRS4 437 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 SARDHQ9UL12 918 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 VANGL2Q9ULK5 521 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 RAXQ9Y2V3 346 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 PCDHGB2Q9Y5G2 931 aa12.03□□□□□ -0.48
VARS2-208ENST00000477052 TP53BP1Q12888 1972 aaPredicted RBP12.03□□□□□ -0.48
VARS2-208ENST00000477052 NYNRINQ9P2P1 1898 aaKnown RBP12.02□□□□□ -0.48
VARS2-208ENST00000477052 NBEAQ8NFP9 2946 aa12.02□□□□□ -0.48
VARS2-208ENST00000477052 LAMA5O15230 3695 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 ANKRD11Q6UB99 2663 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3EA0A087X179 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3KA0A087X1G2 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 TARSL2A2RTX5 802 aaKnown RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3FA6NER0 549 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 FOXN3O00409 490 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 PON1P27169 355 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 DRD3P35462 400 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 MTIF2P46199 727 aaKnown RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 CCT8P50990 548 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 ADPRHP54922 357 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 RNASE9P60153 205 aaKnown RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 RACK1P63244 317 aaKnown RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 AUHQ13825 339 aaKnown RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 SUZ12Q15022 739 aaKnown RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 ACCSLQ4AC99 568 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 PTPN20Q4JDL3 420 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 OTUD1Q5VV17 481 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3GQ6DHY5 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 FOXR2Q6PJQ5 311 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 LRSAM1Q6UWE0 723 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 DHRS13Q6UX07 377 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 GBP6Q6ZN66 633 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 BEND5Q7L4P6 421 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 SLC47A2Q86VL8 602 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 ZNF557Q8N988 423 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 OR2T34Q8NGX1 318 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 FRS2Q8WU20 508 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 SHC3Q92529 594 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 SERAC1Q96JX3 654 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 RPRD1AQ96P16 312 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 SLC2A13Q96QE2 648 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 CDC6Q99741 560 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 ACE2Q9BYF1 805 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 IRX2Q9BZI1 471 aaPredicted RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 SIK2Q9H0K1 926 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 CCDC86Q9H6F5 360 aaKnown RBP12.02□□□□□ -0.49
VARS2-208ENST00000477052 OSGEPQ9NPF4 335 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 ANLNQ9NQW6 1124 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.49
VARS2-208ENST00000477052 KIAA1468Q9P260 1216 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 APEX2Q9UBZ4 518 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 RWDD2AQ9UIY3 292 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 CA5BQ9Y2D0 317 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 HS3ST4Q9Y661 456 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 ITIH6Q6UXX5 1313 aa12.02□□□□□ -0.49
VARS2-208ENST00000477052 CELSR3Q9NYQ7 3312 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 GOLGA4Q13439 2230 aaKnown RBP12.01□□□□□ -0.49
VARS2-208ENST00000477052 ITPR1Q14643 2758 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 A0A1W2PR77 199 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 LRRC72A6NJI9 287 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 I6L893 689 aaPredicted RBP12.01□□□□□ -0.49
VARS2-208ENST00000477052 RNF103O00237 685 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 VILLO15195 856 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 PAGE1O75459 146 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 CNTN5O94779 1100 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 GOT1P17174 413 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 ABCB4P21439 1286 aa12.01□□□□□ -0.49
VARS2-208ENST00000477052 CLCN1P35523 988 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms