RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 MMP8P22894 467 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 ST8SIA6P61647 398 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 RPS14P62263 151 aaKnown RBP16.7■□□□□ 0.26
COL1A1-205ENST00000476387 SIM1P81133 766 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-205ENST00000476387 DEUP1Q05D60 604 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 ARID5BQ14865 1188 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 SLC25A52Q3SY17 297 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 BRMS1LQ5PSV4 323 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 CACUL1Q86Y37 369 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 ZCCHC9Q8N567 271 aaKnown RBP16.7■□□□□ 0.26
COL1A1-205ENST00000476387 ZNF366Q8N895 744 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 OR2I1PQ8NGU4 316 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 SLC30A5Q8TAD4 765 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 RPRD1AQ96P16 312 aaPredicted RBP16.7■□□□□ 0.26
COL1A1-205ENST00000476387 MIR1-1HGQ9H1L0 117 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 CBX8Q9HC52 389 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 METTL5Q9NRN9 209 aaKnown RBP16.7■□□□□ 0.26
COL1A1-205ENST00000476387 PIGVQ9NUD9 493 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 MYO6Q9UM54 1294 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 KNL1Q8NG31 2342 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 IGF2RP11717 2491 aa16.7■□□□□ 0.26
COL1A1-205ENST00000476387 NUMA1Q14980 2115 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 A0A1B0GTH6 734 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 A0A1B0GVM2 712 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 SPAARA0A1B0GVQ0 90 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 A0A1W2PQC6 194 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 TCAF2A6NFQ2 919 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 GOLGA6L19H0YKK7 550 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 KRT37O76014 449 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 DNTTP04053 509 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 PROS1P07225 676 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 FLT3P36888 993 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 CSKP41240 450 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 CENPCQ03188 943 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 CLEC16AQ2KHT3 1053 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 ZSCAN23Q3MJ62 389 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 TTC31Q49AM3 519 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-205ENST00000476387 OTUD1Q5VV17 481 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-205ENST00000476387 ZNF776Q68DI1 518 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-205ENST00000476387 IL27RAQ6UWB1 636 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 FAM124AQ86V42 546 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 LUZP1Q86V48 1076 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 C1orf216Q8TAB5 229 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 PGAP3Q96FM1 320 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-205ENST00000476387 MYO19Q96H55 970 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 TBCBQ99426 244 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 ADAM33Q9BZ11 813 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 BTBD1Q9H0C5 482 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 RSPH9Q9H1X1 276 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-205ENST00000476387 WDCPQ9H6R7 721 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 OSGEPQ9NPF4 335 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 KIAA1522Q9P206 1035 aaPredicted RBP16.69■□□□□ 0.26
COL1A1-205ENST00000476387 INTS6Q9UL03 887 aaKnown RBP16.69■□□□□ 0.26
COL1A1-205ENST00000476387 SCML1Q9UN30 329 aa16.69■□□□□ 0.26
COL1A1-205ENST00000476387 PAGE1O75459 146 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 TRIM16O95361 564 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 CALB1P05937 261 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 SRPRAP08240 638 aaKnown RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 ZNF883P0CG24 379 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 UNGP13051 313 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 TFE3P19532 575 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 ACSL1P33121 698 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 RDXP35241 583 aaKnown RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 CXCR3P49682 368 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 AUHQ13825 339 aaKnown RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 HNRNPA1L2Q32P51 320 aaKnown RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 PITRM1Q5JRX3 1037 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 UNQ6494/PRO21346Q6UXR6 183 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 USP30Q70CQ3 517 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 ARCQ7LC44 396 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 CIR1Q86X95 450 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 NT5C3BQ969T7 300 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 MRGPRX3Q96LB0 322 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 PRMT1Q99873 361 aaKnown RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 AGPAT1Q99943 283 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 SCNM1Q9BWG6 230 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 TKTL2Q9H0I9 626 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 SIK2Q9H0K1 926 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 SGK2Q9HBY8 427 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 ADAM22Q9P0K1 906 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 EIF2B4Q9UI10 523 aaKnown RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 TMEM59LQ9UK28 342 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 VANGL2Q9ULK5 521 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.68■□□□□ 0.26
COL1A1-205ENST00000476387 HS3ST4Q9Y661 456 aa16.68■□□□□ 0.26
COL1A1-205ENST00000476387 RNASEH1O60930 286 aaKnown RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 ADCY5O95622 1261 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 SEMA4FO95754 770 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 CER1O95813 267 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 SDC4P31431 198 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 GGCXP38435 758 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 AFF3P51826 1226 aaKnown RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 OXCT1P55809 520 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 SFSWAPQ12872 951 aaKnown RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 SLC12A1Q13621 1099 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 ASIC2Q16515 512 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 ZNF423Q2M1K9 1284 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 FSCBQ5H9T9 825 aa16.67■□□□□ 0.26
COL1A1-205ENST00000476387 RNF219Q5W0B1 726 aaPredicted RBP16.67■□□□□ 0.26
COL1A1-205ENST00000476387 FBXL22Q6P050 247 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms