RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 MCM3P25205 808 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 PBX1P40424 430 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 PBX3P40426 434 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 HNF4AP41235 474 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 SELENOPP49908 381 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 MRPL12P52815 198 aaKnown RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 EIF4A1P60842 406 aaKnown RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 UFM1P61960 85 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 JAG1P78504 1218 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 RBP5P82980 135 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 ITIH3Q06033 890 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 TMEM115Q12893 351 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 BFSP1Q12934 665 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 THOC5Q13769 683 aaKnown RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 PRKD1Q15139 912 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 DNAJC21Q5F1R6 531 aaKnown RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 ZNF766Q5HY98 468 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 PLEKHS1Q5SXH7 462 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 CCDC144NLQ6NUI1 221 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 TTI2Q6NXR4 508 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 NCEH1Q6PIU2 408 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 RRM2BQ7LG56 351 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 DTX2Q86UW9 622 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 CAND1Q86VP6 1230 aaKnown RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 P3H2Q8IVL5 708 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 KIAA2013Q8IYS2 634 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 SUPT20HQ8NEM7 779 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 OR6J1Q8NGC5 347 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 LPIN2Q92539 896 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 FKBP10Q96AY3 582 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 KLHL29Q96CT2 875 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 R3HDM4Q96D70 268 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 SIPA1Q96FS4 1042 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 ZNF845Q96IR2 970 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 LOXL4Q96JB6 756 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 FAR2Q96K12 515 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 ADAM2Q99965 735 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 HGH1Q9BTY7 390 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 PDE11AQ9HCR9 933 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 TRIM36Q9NQ86 728 aa4.47□□□□□ -1.69
VPS13D-207ENST00000476169 TLR8Q9NR97 1041 aaKnown RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 SLC25A10Q9UBX3 287 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 NKX1-2Q9UD57 310 aaPredicted RBP4.47□□□□□ -1.69
VPS13D-207ENST00000476169 GAGE10A6NGK3 116 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 UNC119BA6NIH7 251 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MBD3L5A6NJ08 208 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 C19orf81C9J6K1 198 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 RTCAO00442 366 aaKnown RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 TGFB1I1O43294 461 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 CTIFO43310 598 aaKnown RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ENTPD3O75355 529 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ERBB2P04626 1255 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 EIF2S1P05198 315 aaKnown RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 THEGLP0DJG4 465 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 COX7A2P14406 83 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 LAG3P18627 525 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ICAM3P32942 547 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 BMPR1AP36894 532 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 CLCN2P51788 898 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 HNRNPMP52272 730 aaKnown RBP eCLIP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 RAD23AP54725 363 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 CDH8P55286 799 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 NXPH1P58417 271 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 RBM6P78332 1123 aaKnown RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MTAPQ13126 283 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 SEMA3BQ13214 749 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 CBFBQ13951 182 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 NTRK2Q16620 822 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ST3GAL2Q16842 350 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 AAK1Q2M2I8 961 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MMEL1Q495T6 779 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 SLC9B1Q4ZJI4 515 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 XP32Q5T750 250 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 TEDDM1Q5T9Z0 273 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 GARNL3Q5VVW2 1013 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF585AQ6P3V2 769 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MTHFD1LQ6UB35 978 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 BTN2A1Q7KYR7 527 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 CHST9Q7L1S5 443 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 RTL10Q7L3V2 364 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MAVSQ7Z434 540 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MON1AQ86VX9 555 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 EPHX4Q8IUS5 362 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ADGRF2Q8IZF7 708 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF276Q8N554 614 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 APPL2Q8NEU8 664 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 OR8H1Q8NGG4 311 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 SLC2A12Q8TD20 617 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 SOCS4Q8WXH5 440 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 KCNJ9Q92806 393 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ARHGEF2Q92974 986 aaKnown RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 INTS12Q96CB8 462 aaKnown RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 RNFT2Q96EX2 444 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 PTCD3Q96EY7 689 aaKnown RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MASTLQ96GX5 879 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 C5orf34Q96MH7 638 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 MYCBPQ99417 103 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 DPCDQ9BVM2 203 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 TEX12Q9BXU0 123 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 XPO4Q9C0E2 1151 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms