RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 SNX32Q86XE0 403 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 FBXO11Q86XK2 927 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 FAM47BQ8NA70 645 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 LILRB1Q8NHL6 650 aaPredicted RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 PSD2Q9BQI7 771 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 FERMT1Q9BQL6 677 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 RIC8BQ9NVN3 520 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 COMMD8Q9NX08 183 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 PI4KBQ9UBF8 816 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 IPO11Q9UI26 975 aaKnown RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 SERPINA10Q9UK55 444 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 AGO2Q9UKV8 859 aaKnown RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 CROCCQ5TZA2 2017 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 HTRA2O43464 458 aaPredicted RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 SNAP91O60641 907 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 GNA15P30679 374 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 EIF3EP60228 445 aaKnown RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 SNAP25P60880 206 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 IFITM2Q01629 132 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 OXA1LQ15070 435 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 TRIM16LQ309B1 348 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 SLC9B1Q4ZJI4 515 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 C15orf39Q6ZRI6 1047 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 ZBTB46Q86UZ6 589 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 C10orf107Q8IVU9 208 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 CPSF7Q8N684 471 aaKnown RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 RP9Q8TA86 221 aaKnown RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 DCAF4Q8WV16 495 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 VMP1Q96GC9 406 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 SLC29A1Q99808 456 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 FRMD8Q9BZ67 464 aaPredicted RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 DUS2Q9NX74 493 aaKnown RBP10.79□□□□□ -0.68
ABCF1-205ENST00000475993 SPEF1Q9Y4P9 236 aa10.79□□□□□ -0.68
ABCF1-205ENST00000475993 SLC16A4O15374 487 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 GMNNO75496 209 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 JAK1P23458 1154 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 RPL10P27635 214 aaKnown RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 HSPA1LP34931 641 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 SERPINB5P36952 375 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 NLRP11P59045 1033 aaKnown RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 TRPC3Q13507 836 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 PPP6R3Q5H9R7 873 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 PPM1LQ5SGD2 360 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 USP37Q86T82 979 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 ZNF354CQ86Y25 554 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 KIAA2013Q8IYS2 634 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 ATP6V1E2Q96A05 226 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 ZNF641Q96N77 438 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 PSKH2Q96QS6 385 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 WDR11Q9BZH6 1224 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 CDH19Q9H159 772 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 SEMA6AQ9H2E6 1030 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 PDZD7Q9H5P4 517 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 SERPINB13Q9UIV8 391 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 CNTNAP2Q9UHC6 1331 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 APOC4-APOC2K7ER74 178 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 KPNA4O00629 521 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 B4GALT4O60513 344 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 GLRA3O75311 464 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 PEX14O75381 377 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 APOC2P02655 101 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 PRKCGP05129 697 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 ZNF135P52742 658 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 NKX2-5P52952 324 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 ATXN3P54252 364 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 SLC25A11Q02978 314 aaKnown RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 PMS2P3Q13401 168 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 SMU1Q2TAY7 513 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 BRDTQ58F21 947 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 GPR107Q5VW38 600 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 UNC5AQ6ZN44 842 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 THNSL1Q8IYQ7 743 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 RNF148Q8N7C7 305 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 C7orf57Q8NEG2 295 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 NPLOC4Q8TAT6 608 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 TFAP2CQ92754 450 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 USP13Q92995 863 aaPredicted RBP10.78□□□□□ -0.68
ABCF1-205ENST00000475993 ACDQ96AP0 544 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 FAF2Q96CS3 445 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 WNK4Q96J92 1243 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 HERC2P3Q9BVR0 1158 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 MROQ9BYG7 248 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 FANCEQ9HB96 536 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 ATP11BQ9Y2G3 1177 aa10.78□□□□□ -0.68
ABCF1-205ENST00000475993 SLC15A5A6NIM6 579 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 A8MX80 341 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 DYNC1LI2O43237 492 aaPredicted RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 KCNJ13O60928 360 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 MYO1DO94832 1006 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TAL1P17542 331 aaPredicted RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 PROZP22891 400 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 KDELR1P24390 212 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CNTFP26441 200 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 RFTN1Q14699 578 aaPredicted RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 LSM12Q3MHD2 195 aaKnown RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 DNAJC24Q6P3W2 148 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TRMT10BQ6PF06 316 aaKnown RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 DCUN1D2Q6PH85 259 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TMEM26Q6ZUK4 368 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CAND1Q86VP6 1230 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms