RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 EPN2O95208 641 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 CHRNB1P11230 501 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 OAZ1P54368 228 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 PMPCAQ10713 525 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 PRTGQ2VWP7 1150 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 C10orf62Q5T681 223 aaPredicted RBP7.06□□□□□ -1.28
SMC5-203ENST00000475540 DGAT2L7PQ6IED9 249 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 RFX8Q6ZV50 586 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 OR6Y1Q8NGX8 325 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 SLC2A12Q8TD20 617 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 TMEM174Q8WUU8 243 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 FAM234AQ9H0X4 552 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 GRHPRQ9UBQ7 328 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 SLC25A13Q9UJS0 675 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 FBXO4Q9UKT5 387 aa7.06□□□□□ -1.28
SMC5-203ENST00000475540 FAM90A10PA6NDY2 464 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 TBXAS1P24557 533 aaPredicted RBP7.05□□□□□ -1.28
SMC5-203ENST00000475540 CHKAP35790 457 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 CDK18Q07002 472 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 TIGD6Q17RP2 521 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 ARL13AQ5H913 290 aaPredicted RBP7.05□□□□□ -1.28
SMC5-203ENST00000475540 KIAA1324Q6UXG2 1013 aaKnown RBP7.05□□□□□ -1.28
SMC5-203ENST00000475540 RTL10Q7L3V2 364 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 TMEM199Q8N511 208 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 ARRDC3Q96B67 414 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 ABHD16BQ9H3Z7 469 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 TASP1Q9H6P5 420 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 ARL15Q9NXU5 204 aa7.05□□□□□ -1.28
SMC5-203ENST00000475540 A6NNC1 897 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 H0Y3Z8 333 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 GRM8O00222 908 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 OAZ2O95190 189 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 NTN1O95631 604 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 LDHAP00338 332 aaKnown RBP7.04□□□□□ -1.28
SMC5-203ENST00000475540 FGF2P09038 288 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 ALKBH1Q13686 389 aaKnown RBP7.04□□□□□ -1.28
SMC5-203ENST00000475540 DCTN1Q14203 1278 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 PTGR1Q14914 329 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 ALG10Q5BKT4 473 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 ALG10BQ5I7T1 473 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 DAB2IPQ5VWQ8 1189 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 TTLL5Q6EMB2 1281 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 HMBOX1Q6NT76 420 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 IGFN1Q86VF2 1251 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 FAM110DQ8TAY7 271 aaPredicted RBP7.04□□□□□ -1.28
SMC5-203ENST00000475540 TRIM31Q9BZY9 425 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 IL21RQ9HBE5 538 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 SPAG4Q9NPE6 437 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 KCND3Q9UK17 655 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 PKP3Q9Y446 797 aa7.04□□□□□ -1.28
SMC5-203ENST00000475540 TTC3P53804 2025 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 E7EVH7 732 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 INSIG1O15503 277 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 NEURL1O76050 574 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 SNHG28P0DPA3 235 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 PKMP14618 531 aaKnown RBP7.03□□□□□ -1.28
SMC5-203ENST00000475540 TNFRSF1BP20333 461 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 PRPH2P23942 346 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 CST5P28325 142 aaPredicted RBP7.03□□□□□ -1.28
SMC5-203ENST00000475540 FHL1Q13642 323 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 SLC30A9Q6PML9 568 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 PTGR2Q8N8N7 351 aaPredicted RBP7.03□□□□□ -1.28
SMC5-203ENST00000475540 FSIP1Q8NA03 581 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 LPAR1Q92633 364 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 KCNJ9Q92806 393 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 HDHD5Q9BXW7 423 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 EBF3Q9H4W6 596 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 SAYSD1Q9NPB0 183 aa7.03□□□□□ -1.28
SMC5-203ENST00000475540 SRP68Q9UHB9 627 aaKnown RBP7.03□□□□□ -1.28
SMC5-203ENST00000475540 IPO5O00410 1097 aaKnown RBP7.02□□□□□ -1.29
SMC5-203ENST00000475540 SEPT4O43236 478 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 KRT38O76015 456 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 HLA-DQA2P01906 255 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 CHN1P15882 459 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 GSTM2P28161 218 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 FOXG1P55316 489 aaPredicted RBP7.02□□□□□ -1.29
SMC5-203ENST00000475540 TUBB8Q3ZCM7 444 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 MTFR2Q6P444 385 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 SYNE3Q6ZMZ3 975 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 SYT13Q7L8C5 426 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 GALNT15Q8N3T1 639 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 MYCT1Q8N699 235 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 C9orf106Q8NAJ2 232 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 TRAPPC12Q8WVT3 735 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 GOLGA1Q92805 767 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 ZNF419Q96HQ0 510 aaPredicted RBP7.02□□□□□ -1.29
SMC5-203ENST00000475540 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.02□□□□□ -1.29
SMC5-203ENST00000475540 ZNF304Q9HCX3 659 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 RCE1Q9Y256 329 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 CACNA1IQ9P0X4 2223 aa7.02□□□□□ -1.29
SMC5-203ENST00000475540 TCRBV7S3A2A0A539 114 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 FAM90A20PA6NIJ5 464 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 IFNA2P01563 188 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 CYP21A2P08686 494 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 KLRC2P26717 231 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 SLC16A2P36021 539 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 POLD2P49005 469 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 RBM5P52756 815 aaKnown RBP eCLIP7.01□□□□□ -1.29
SMC5-203ENST00000475540 LINC00205P59089 165 aa7.01□□□□□ -1.29
SMC5-203ENST00000475540 RHAGQ02094 409 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms