RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 NEK3P51956 506 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 MGAT5Q09328 741 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 CRYMQ14894 314 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 DDR2Q16832 855 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 LVRNQ6Q4G3 990 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 SH2D5Q6ZV89 423 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 PRPF39Q86UA1 669 aaKnown RBP22.26■■□□□ 1.15
CCM2-206ENST00000474617 UMODL1-AS1Q8N2C9 162 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 DEFB118Q96PH6 123 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 FCRL5Q96RD9 977 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 IL12RB2Q99665 862 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 TTLL2Q9BWV7 592 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 SIK2Q9H0K1 926 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 KIF9Q9HAQ2 790 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.26■■□□□ 1.15
CCM2-206ENST00000474617 VWA8A3KMH1 1905 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.26■■□□□ 1.15
CCM2-206ENST00000474617 WDR27A2RRH5 827 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 COPEO14579 308 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 ZBTB24O43167 697 aaPredicted RBP22.26■■□□□ 1.15
CCM2-206ENST00000474617 USP1O94782 785 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 IL1BP01584 269 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 AMHP03971 560 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 ALDH7A1P49419 539 aaKnown RBP22.26■■□□□ 1.15
CCM2-206ENST00000474617 TUBP50607 506 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 NIPAL4Q0D2K0 466 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 CDH17Q12864 832 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 USP41Q3LFD5 358 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 SLC8B1Q6J4K2 584 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 ARHGAP12Q8IWW6 846 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 CCDC33Q8N5R6 958 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 RAB3IL1Q8TBN0 382 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 ZNF398Q8TD17 642 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 TCP10LQ8TDR4 215 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 LRRN4Q8WUT4 740 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 PTCD2Q8WV60 388 aaKnown RBP22.26■■□□□ 1.15
CCM2-206ENST00000474617 ARNTL2Q8WYA1 636 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 PAIP2Q9BPZ3 127 aaKnown RBP22.26■■□□□ 1.15
CCM2-206ENST00000474617 NSMCE4AQ9NXX6 385 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 GMIPQ9P107 970 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 KLHL14Q9P2G3 628 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 SFMBT1Q9UHJ3 866 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 VANGL2Q9ULK5 521 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 HS3ST4Q9Y661 456 aa22.26■■□□□ 1.15
CCM2-206ENST00000474617 IGLV3-10A0A075B6K4 115 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 FAM237BA0A1B0GVD1 139 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 FOXO6A8MYZ6 492 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 TRIM49D1C9J1S8 452 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 FSBPO95073 299 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 ZDHHC11BP0C7U3 371 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 DHRS4L1P0CG22 281 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 CCNB1P14635 433 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 MGAT1P26572 445 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 MTM1Q13496 603 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 RNF187Q5TA31 235 aaPredicted RBP22.25■■□□□ 1.15
CCM2-206ENST00000474617 CNKSR3Q6P9H4 555 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 SLC39A5Q6ZMH5 540 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 TMEM135Q86UB9 458 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 MPP5Q8N3R9 675 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 ATP2A3Q93084 1043 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 BEGAINQ9BUH8 593 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 UBE2OQ9C0C9 1292 aaKnown RBP22.25■■□□□ 1.15
CCM2-206ENST00000474617 ZYG11BQ9C0D3 744 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 HAUS2Q9NVX0 235 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 TXNDC16Q9P2K2 825 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 MTRRQ9UBK8 725 aa22.25■■□□□ 1.15
CCM2-206ENST00000474617 HBS1LQ9Y450 684 aaKnown RBP22.25■■□□□ 1.15
CCM2-206ENST00000474617 KLF11O14901 512 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 EFEMP2O95967 443 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 IGLV3-27P01718 113 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 CCL5P13501 91 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 GRIA1P42261 906 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 GEMP55040 296 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 SESN2P58004 480 aaPredicted RBP22.24■■□□□ 1.15
CCM2-206ENST00000474617 ZBTB17Q13105 803 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 IKBKEQ14164 716 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 MGAT5BQ3V5L5 792 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 RNF43Q68DV7 783 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 DNAAF3Q8N9W5 541 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 ATAD1Q8NBU5 361 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 ZSCAN18Q8TBC5 510 aaPredicted RBP22.24■■□□□ 1.15
CCM2-206ENST00000474617 CCT6BQ92526 530 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 OXNAD1Q96HP4 312 aaPredicted RBP22.24■■□□□ 1.15
CCM2-206ENST00000474617 RNF208Q9H0X6 261 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 TMEM248Q9NWD8 314 aa22.24■■□□□ 1.15
CCM2-206ENST00000474617 MSI1O43347 362 aaKnown RBP22.23■■□□□ 1.15
CCM2-206ENST00000474617 MAFKO60675 156 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 JCHAINP01591 159 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 NFKB1P19838 968 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 FOXN2P32314 431 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 CD68P34810 354 aaPredicted RBP22.23■■□□□ 1.15
CCM2-206ENST00000474617 PPARDQ03181 441 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 SLC1A5Q15758 541 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 FYB2Q5VWT5 728 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 AGAP3Q96P47 875 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 CPNE1Q99829 537 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 MLXIPLQ9NP71 852 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 PRDM5Q9NQX1 630 aaPredicted RBP22.23■■□□□ 1.15
CCM2-206ENST00000474617 OSER1Q9NX31 292 aa22.23■■□□□ 1.15
CCM2-206ENST00000474617 MARCH2Q9P0N8 246 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms