RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 GALNT3Q14435 633 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 DHX8Q14562 1220 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 POSTNQ15063 836 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 ANKRD1Q15327 319 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 GXYLT1Q4G148 440 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 CTXN3Q4LDR2 81 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 JMJD6Q6NYC1 403 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 AADACL2Q6P093 401 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 SHC4Q6S5L8 630 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 ANKS1BQ7Z6G8 1248 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 GALNT7Q86SF2 657 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 ARFGAP1Q8N6T3 406 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 CENPIQ92674 756 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 KTI12Q96EK9 354 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 HMCESQ96FZ2 354 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 PYM1Q9BRP8 204 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 ABHD16BQ9H3Z7 469 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 MYH16Q9H6N6 1097 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 MOV10Q9HCE1 1003 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 TXNRD2Q9NNW7 524 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 RNF146Q9NTX7 359 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 DTX4Q9Y2E6 619 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 DERAQ9Y315 318 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 PCDHA10Q9Y5I2 948 aa3.64□□□□□ -1.83
ECHDC1-213ENST00000474240 KIR2DS5A0A0G2JLQ3 304 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 GAGE12JA6NER3 117 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 FAM90A20PA6NIJ5 464 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 KIR2DS3K7RE56 304 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 GRM8O00222 908 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 SOCS2O14508 198 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 PPEF2O14830 753 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 MSI1O43347 362 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 TLX3O43711 291 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 TULP3O75386 442 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 HEXIM1O94992 359 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 KAT7O95251 611 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 METTL18O95568 372 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 NFATC1O95644 943 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 TOP3BO95985 862 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 IGKV2-30P06310 120 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 TBXAS1P24557 533 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 SHC2P98077 582 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 CDK18Q07002 472 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 INO80DQ53TQ3 878 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 RUNDC3AQ59EK9 446 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 RUSC1-AS1Q66K80 236 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC2A7Q6PXP3 512 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 TRAPPC11Q7Z392 1133 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 C2CD5Q86YS7 1000 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 DDIASQ8IXT1 998 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 NANOGP1Q8N7R0 232 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 NOC3LQ8WTT2 800 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 ARRDC3Q96B67 414 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 GCC1Q96CN9 775 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 ZSCAN31Q96LW9 406 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 FRG2BQ96QU4 278 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 ZNF347Q96SE7 839 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 WDR83Q9BRX9 315 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 PPCSQ9HAB8 311 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 DECR2Q9NUI1 292 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 RRP7AQ9Y3A4 280 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 PKP3Q9Y446 797 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 HS3ST3B1Q9Y662 390 aa3.63□□□□□ -1.83
ECHDC1-213ENST00000474240 AGAP5A6NIR3 686 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 ZC3H11AO75152 810 aaKnown RBP eCLIP3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 WNT1P04628 370 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 CYP4B1P13584 511 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 PKMP14618 531 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 CHN1P15882 459 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 GSTM2P28161 218 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 CCKBRP32239 447 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 ME1P48163 572 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 BIRC3Q13489 604 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 FHL1Q13642 323 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 RAPGEF1Q13905 1077 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 Q4G0T1 1027 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 ALG10Q5BKT4 473 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 ALG10BQ5I7T1 473 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 KIAA1755Q5JYT7 1200 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 NAA35Q5VZE5 725 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 C11orf87Q6NUJ2 197 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 DENND1BQ6P3S1 775 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 LDHAL6AQ6ZMR3 332 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 RRAGAQ7L523 313 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 SYT13Q7L8C5 426 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 MDGA2Q7Z553 956 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 MOGAT3Q86VF5 341 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 FTSJ3Q8IY81 847 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 CPXCR1Q8N123 301 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 ANKRD44Q8N8A2 993 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 ARL14EPQ8N8R7 260 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 AFG1LQ8WV93 481 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 TBC1D20Q96BZ9 403 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 ADAD1Q96M93 576 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 PIMREGQ9BSJ6 248 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 TRIM31Q9BZY9 425 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 OSBPL5Q9H0X9 879 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 SLC22A11Q9NSA0 550 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 MTMR4Q9NYA4 1195 aa3.62□□□□□ -1.83
ECHDC1-213ENST00000474240 FBXO40Q9UH90 709 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms