RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 MAOBP27338 520 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 OXTRP30559 389 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 RDXP35241 583 aaKnown RBP18.47■□□□□ 0.55
UPF3A-203ENST00000474056 NSFP46459 744 aaKnown RBP18.47■□□□□ 0.55
UPF3A-203ENST00000474056 ATP11AP98196 1134 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 DUOXA1Q1HG43 343 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 C15orf59Q2T9L4 293 aaPredicted RBP18.47■□□□□ 0.55
UPF3A-203ENST00000474056 RNF219Q5W0B1 726 aaPredicted RBP18.47■□□□□ 0.55
UPF3A-203ENST00000474056 ZNF776Q68DI1 518 aaPredicted RBP18.47■□□□□ 0.55
UPF3A-203ENST00000474056 FAM131BQ86XD5 332 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 ZNF683Q8IZ20 524 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 JOSD2Q8TAC2 188 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 FOXJ1Q92949 421 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 ALG14Q96F25 216 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 NUP58Q9BVL2 599 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 TMEM9BQ9NQ34 198 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 SEPT11Q9NVA2 429 aaKnown RBP18.47■□□□□ 0.55
UPF3A-203ENST00000474056 PLXNA2O75051 1894 aa18.47■□□□□ 0.55
UPF3A-203ENST00000474056 DOCK9Q9BZ29 2069 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 TMEM131Q92545 1883 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 MEI4A8MW99 385 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 CLDN11O75508 207 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 DNTTP04053 509 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 PLK1P53350 603 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 CDH4P55283 916 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 GSCP56915 257 aaPredicted RBP18.46■□□□□ 0.55
UPF3A-203ENST00000474056 CDO1Q16878 200 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 ALFQ53S48 1182 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 PPM1JQ5JR12 505 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 C9orf64Q5T6V5 341 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 DCAF12L1Q5VU92 463 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 CEP76Q8TAP6 659 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 RXFP2Q8WXD0 754 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 BAP1Q92560 729 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 AGPAT1Q99943 283 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 RSPH9Q9H1X1 276 aaPredicted RBP18.46■□□□□ 0.55
UPF3A-203ENST00000474056 ADAM22Q9P0K1 906 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 PAXBP1Q9Y5B6 917 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 KNL1Q8NG31 2342 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 PCNX2A6NKB5 2137 aa18.46■□□□□ 0.55
UPF3A-203ENST00000474056 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-203ENST00000474056 A0A1B0GTH6 734 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 EDDM13A0A1B0GTR0 161 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 C2CD4BA6NLJ0 364 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 E9PAM4 449 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 ENDOD1O94919 500 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 SERPINF2P08697 491 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 ENGP17813 658 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 KCNA4P22459 653 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 ACSL1P33121 698 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 SULT2A1Q06520 285 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 ZNF177Q13360 481 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-203ENST00000474056 ARID5BQ14865 1188 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 CCDC14Q49A88 953 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 FILIP1LQ4L180 1135 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 WDR45BQ5MNZ6 344 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 SYCP2LQ5T4T6 812 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 ARTNQ5T4W7 220 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 SH3PXD2AQ5TCZ1 1133 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 PHF13Q86YI8 300 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-203ENST00000474056 CADM4Q8NFZ8 388 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 PTPRN2Q92932 1015 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 NAP1L5Q96NT1 182 aaPredicted RBP18.45■□□□□ 0.54
UPF3A-203ENST00000474056 CAPN10Q9HC96 672 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 MPP6Q9NZW5 540 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 SLC6A14Q9UN76 642 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 TBC1D30Q9Y2I9 924 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 OR51B4Q9Y5P0 310 aa18.45■□□□□ 0.54
UPF3A-203ENST00000474056 CALB1P05937 261 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 VAV1P15498 845 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 FERP16591 822 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 SDC4P31431 198 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 MAPK8P45983 427 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 OXCT1P55809 520 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 ZBTB16Q05516 673 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 TTC31Q49AM3 519 aaPredicted RBP18.44■□□□□ 0.54
UPF3A-203ENST00000474056 MON1BQ7L1V2 547 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 IRF2BP2Q7Z5L9 587 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 RABEPKQ7Z6M1 372 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 STK40Q8N2I9 435 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 DNASE2BQ8WZ79 361 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 C1orf74Q96LT6 269 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 HAPLN3Q96S86 360 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 FEM1AQ9BSK4 669 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 PABPC3Q9H361 631 aaKnown RBP18.44■□□□□ 0.54
UPF3A-203ENST00000474056 C6orf106Q9H6K1 298 aaPredicted RBP18.44■□□□□ 0.54
UPF3A-203ENST00000474056 CBX8Q9HC52 389 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 TMEM51Q9NW97 253 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 VPS28Q9UK41 221 aa18.44■□□□□ 0.54
UPF3A-203ENST00000474056 IGLV3-10A0A075B6K4 115 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 TARSL2A2RTX5 802 aaKnown RBP18.43■□□□□ 0.54
UPF3A-203ENST00000474056 LRRC53A6NM62 1247 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 DRGXA6NNA5 263 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 METTL12A8MUP2 240 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 MID1O15344 667 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 RHOCP08134 193 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 KRT3P12035 628 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 PTPN9P43378 593 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 UAP1L1Q3KQV9 507 aa18.43■□□□□ 0.54
UPF3A-203ENST00000474056 DAB2IPQ5VWQ8 1189 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms