RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 ZNF420Q8TAQ5 688 aaPredicted RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TBC1D15Q8TC07 691 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 ZDHHC15Q96MV8 337 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CYTH2Q99418 400 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM83CQ9BQN1 747 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TUBGCP2Q9BSJ2 902 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TARS2Q9BW92 718 aaKnown RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 OR2B2Q9GZK3 357 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 PDGFDQ9GZP0 370 aaPredicted RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 VPS33BQ9H267 617 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 TP63Q9H3D4 680 aaPredicted RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC52A2Q9HAB3 445 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A7Q9HAW7 530 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A10Q9HAW8 530 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 UGT1A8Q9HAW9 530 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 SYTL2Q9HCH5 934 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 EPB41L4AQ9HCS5 686 aaPredicted RBP5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 CHST7Q9NS84 486 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 ARL8BQ9NVJ2 186 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 GRID1Q9ULK0 1009 aa5.27□□□□□ -1.57
TMEM39A-206ENST00000473684 COL15A1P39059 1388 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 MAST3O60307 1309 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ATP8B3O60423 1300 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 FLT1P17948 1338 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 BLACEA4D250 179 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 C2orf81A6NN90 581 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF839A8K0R7 811 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 EVPLLA8MZ36 301 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 E7EWF7 191 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PSMD11O00231 422 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 BET1O15155 118 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SULT1B1O43704 296 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 NUAK1O60285 661 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ACSL4O60488 711 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 MYO1DO94832 1006 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CSPG5O95196 566 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PAHP00439 452 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 GH1P01241 217 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SOX5P35711 763 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SLCO1A2P46721 670 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 HAAOP46952 286 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 RNASE9P60153 205 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ESRRGP62508 458 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ECT2LQ008S8 904 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 BTKQ06187 659 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SPARCL1Q14515 664 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 C4orf46Q504U0 113 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 KIAA1755Q5JYT7 1200 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC35F1Q5T1Q4 408 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 FAM171BQ6P995 826 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 HAUS6Q7Z4H7 955 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PRUNE1Q86TP1 453 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF34Q8IZ26 560 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SRBD1Q8N5C6 995 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ANKRD13CQ8N6S4 541 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ARL6IP6Q8N6S5 226 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 KBTBD7Q8WVZ9 684 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SYN2Q92777 582 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 MTBPQ96DY7 904 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 WNK4Q96J92 1243 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 HEXIM2Q96MH2 286 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PANX3Q96QZ0 392 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 AP1M1Q9BXS5 423 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 RMND5AQ9H871 391 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 VPS54Q9P1Q0 977 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 MINPP1Q9UNW1 487 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 GPR55Q9Y2T6 319 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 DTNAQ9Y4J8 743 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 EMSYQ7Z589 1322 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ADGRF5Q8IZF2 1346 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 INO80B-WBP1J3KQ70 363 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 EFCAB14O75071 495 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CAMTA2O94983 1202 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 OLFM2O95897 454 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TTLL1O95922 423 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CBX7O95931 251 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 BMP15O95972 392 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SNRPB2P08579 225 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF865P0CJ78 1059 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SRGAP2CP0DJJ0 459 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SRGAP2BP0DMP2 458 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ATF3P18847 181 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TTKP33981 857 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC26A3P40879 764 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CDKN1CP49918 316 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 DNA2P51530 1060 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PHC1P78364 1004 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 MYBPC1Q00872 1141 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ACAP1Q15027 740 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 EFTUD2Q15029 972 aaKnown RBP eCLIP5.26□□□□□ -1.574e-6■■□□□ 11.5
TMEM39A-206ENST00000473684 OGFRL1Q5TC84 451 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 C1orf146Q5VVC0 180 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SHEQ5VZ18 495 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TTI2Q6NXR4 508 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 OGFOD3Q6PK18 319 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CORO6Q6QEF8 472 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ZDHHC24Q6UX98 284 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 GLRX5Q86SX6 157 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 NLRX1Q86UT6 975 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 RALGPS2Q86X27 583 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms