RNA–Protein interactions for RNA: ENST00000473099.1

VPS13D-205, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 461 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-205ENST00000473099 CLDN11O75508 207 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 GOLGA6DP0CG33 693 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 VAV1P15498 845 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 EPCAMP16422 314 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 TPSB2P20231 275 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 ETFBP38117 255 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 PBX2P40425 430 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 PMS2P54278 862 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 CDH4P55283 916 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 ARL4CP56559 192 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 SARNPP82979 210 aaKnown RBP13.15□□□□□ -0.3
VPS13D-205ENST00000473099 CBLBQ13191 982 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 TPSAB1Q15661 275 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 DUSP6Q16828 381 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 FAM133BQ5BKY9 247 aaKnown RBP13.15□□□□□ -0.3
VPS13D-205ENST00000473099 ARTNQ5T4W7 220 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 TXNDC8Q6A555 127 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 NADSYN1Q6IA69 706 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 CENPUQ71F23 418 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 SPRED2Q7Z698 418 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 DENND1CQ8IV53 801 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 ARHGAP12Q8IWW6 846 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 HS6ST3Q8IZP7 471 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 LGI2Q8N0V4 545 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 ARL14EPQ8N8R7 260 aaPredicted RBP13.15□□□□□ -0.3
VPS13D-205ENST00000473099 NAT8LQ8N9F0 302 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 CPT1BQ92523 772 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 PRCCQ92733 491 aaPredicted RBP13.15□□□□□ -0.3
VPS13D-205ENST00000473099 ZFRQ96KR1 1074 aaKnown RBP13.15□□□□□ -0.3
VPS13D-205ENST00000473099 TTC25Q96NG3 672 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 C10orf88Q9H8K7 445 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 RAB6BQ9NRW1 208 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 HAUS2Q9NVX0 235 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 GOLGA6AQ9NYA3 693 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 MPP6Q9NZW5 540 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 IGSF9Q9P2J2 1179 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 CPQQ9Y646 472 aa13.15□□□□□ -0.3
VPS13D-205ENST00000473099 A0A1W2PRU2 124 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 ERI2A8K979 691 aaKnown RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 DFFAO00273 331 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 RAMP2O60895 175 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 CSPG5O95196 566 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 RHOP08100 348 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 CHKAP35790 457 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 EIF3BP55884 814 aaKnown RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 IFI35P80217 286 aaPredicted RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 CYP4F8P98187 520 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 SEMA5AQ13591 1074 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 KCNJ11Q14654 390 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 HIF1AQ16665 826 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 PARP6Q2NL67 630 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 LRIT3Q3SXY7 679 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 LRIG3Q6UXM1 1119 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 HTR3DQ70Z44 454 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 CROCCP2Q86T23 111 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 PRUNE1Q86TP1 453 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 FAM217AQ8IXS0 508 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 PDIK1LQ8N165 341 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 CPXM2Q8N436 756 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 MAB21L3Q8N8X9 362 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 MCUQ8NE86 351 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 CCDC110Q8TBZ0 833 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 NSMCE1Q8WV22 266 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 UBLCP1Q8WVY7 318 aaPredicted RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 IGSF8Q969P0 613 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 GDAP1L1Q96MZ0 367 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 MAGEH1Q9H213 219 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 PABPC3Q9H361 631 aaKnown RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 TASP1Q9H6P5 420 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 SFXN1Q9H9B4 322 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 EIF2B3Q9NR50 452 aaKnown RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 GKN1Q9NS71 199 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 KLHL8Q9P2G9 620 aaPredicted RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 AGO1Q9UL18 857 aaKnown RBP13.14□□□□□ -0.31
VPS13D-205ENST00000473099 ARHGAP26Q9UNA1 814 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 ATP8A1Q9Y2Q0 1164 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 SH3BP1Q9Y3L3 701 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 COL6A3P12111 3177 aa13.14□□□□□ -0.31
VPS13D-205ENST00000473099 DOCK8Q8NF50 2099 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 KIF26AQ9ULI4 1882 aaPredicted RBP13.13□□□□□ -0.31
VPS13D-205ENST00000473099 E7EVH7 732 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 MATN3O15232 486 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 PSMD3O43242 534 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 MAFKO60675 156 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 RFPL2O75678 378 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 SASH3O75995 380 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 KLKB1P03952 638 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 IRF1P10914 325 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 TCF3P15923 654 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 PTPN3P26045 913 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 OR1E1P30953 314 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 SLC6A4P31645 630 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 HSD17B3P37058 310 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 AVPR1AP37288 418 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 POLD3Q15054 466 aaPredicted RBP13.13□□□□□ -0.31
VPS13D-205ENST00000473099 TEX44Q53QW1 395 aa13.13□□□□□ -0.31
VPS13D-205ENST00000473099 ALFQ53S48 1182 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms