RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 TTPALQ9BTX7 342 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 METTL22Q9BUU2 404 aaPredicted RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 USP40Q9NVE5 1235 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 THAP1Q9NVV9 213 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 TAB2Q9NYJ8 693 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 ZDHHC9Q9Y397 364 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 MTF2Q9Y483 593 aaPredicted RBP2.84□□□□□ -1.96
XRN1-210ENST00000472697 PCDHA5Q9Y5H7 936 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 SNX11Q9Y5W9 270 aa2.84□□□□□ -1.96
XRN1-210ENST00000472697 CHD4Q14839 1912 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 MROH1Q8NDA8 1641 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 PLEKHH2Q8IVE3 1493 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.83□□□□□ -1.96
XRN1-210ENST00000472697 TARSL2A2RTX5 802 aaKnown RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 PRAMEF2O60811 474 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ZWINTO95229 277 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 SLU7O95391 586 aaKnown RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 PENKP01210 267 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 GASTP01350 101 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 TFRCP02786 760 aaKnown RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 SPATA31D3P0C874 917 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 CYP2C8P10632 490 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ATP5F1P24539 256 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 HNF1BP35680 557 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 BUD31P41223 144 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 VIPR2P41587 438 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 SLC15A1P46059 708 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 NRIP1P48552 1158 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 TDO2P48775 406 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 POLGP54098 1239 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 CLNS1AP54105 237 aaKnown RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 PMS2P54278 862 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 MFAP4P55083 255 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 F2RL1P55085 397 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 NAP1L1P55209 391 aaKnown RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 CLRN1P58418 232 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 EFNB1P98172 346 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 UBXN1Q04323 297 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ZBTB16Q05516 673 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 CSHL1Q14406 222 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 IL13RA2Q14627 380 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ASTE1Q2TB18 679 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 PRR31Q5SQ13 230 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 METRNLQ641Q3 311 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 RAB12Q6IQ22 244 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 INO80CQ6PI98 192 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 SPATA31D4Q6ZUB0 917 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 GALNT7Q86SF2 657 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 NOXA1Q86UR1 476 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 SLC4A11Q8NBS3 891 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 HJURPQ8NCD3 748 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 IPMKQ8NFU5 416 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 SLC2A12Q8TD20 617 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 AFAP1L1Q8TED9 768 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ATG4AQ8WYN0 398 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 TFAP2CQ92754 450 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 MISP3Q96FF7 219 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 CABS1Q96KC9 395 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 PRAM1Q96QH2 718 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ZNF341Q9BYN7 854 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 SYNCQ9H7C4 482 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 LIN28AQ9H9Z2 209 aaKnown RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 PDE11AQ9HCR9 933 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 MTMR4Q9NYA4 1195 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 MOCS1Q9NZB8 636 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 NDUFAF4Q9P032 175 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 SUCLA2Q9P2R7 463 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 FBXL17Q9UF56 701 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 GTF3C4Q9UKN8 822 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 BAG5Q9UL15 447 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 TIAM1Q13009 1591 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 A0A1W2PR77 199 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 OR2A25A4D2G3 310 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 TRIM64CA6NLI5 447 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 HOXA3O43365 443 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 KERAO60938 352 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 STAM2O75886 525 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ENDOUP21128 410 aaKnown RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 RBL1P28749 1068 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 SLC16A2P36021 539 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ETV4P43268 484 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 MVDP53602 400 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 RAD23AP54725 363 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 WNT3P56703 355 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ADAM17P78536 824 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ADORA2A-AS1P86434 159 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 CHRNEQ04844 493 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 YWHAHQ04917 246 aaPredicted RBP2.83□□□□□ -1.96
XRN1-210ENST00000472697 ABHD18Q0P651 414 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 IL11RAQ14626 422 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 MGAT5BQ3V5L5 792 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 IGSF11Q5DX21 431 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 RAB41Q5JT25 222 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 KCNT1Q5JUK3 1230 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 LIPMQ5VYY2 423 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 LRRC8EQ6NSJ5 796 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 FAM180AQ6UWF9 173 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 TMPRSS9Q7Z410 1059 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 CCDC91Q7Z6B0 441 aa2.83□□□□□ -1.96
XRN1-210ENST00000472697 ZC3H18Q86VM9 953 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms