RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 MAN2B1O00754 1011 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 NCAM2O15394 837 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 NARSO43776 548 aaKnown RBP17.3■□□□□ 0.36
CCM2-205ENST00000472223 TULP3O75386 442 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 APODP05090 189 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 TGM2P21980 687 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 NR2C2P49116 596 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 DMC1Q14565 340 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 LLGL1Q15334 1064 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 TAZQ16635 292 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 PARP15Q460N3 678 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 SLC44A4Q53GD3 710 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 RNF219Q5W0B1 726 aaPredicted RBP17.3■□□□□ 0.36
CCM2-205ENST00000472223 PAPD7Q5XG87 772 aaKnown RBP17.3■□□□□ 0.36
CCM2-205ENST00000472223 IL31Q6EBC2 164 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 NLRP14Q86W24 1093 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 WFIKKN2Q8TEU8 576 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 MYEOVQ96EZ4 313 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 SPON2Q9BUD6 331 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 HEY1Q9Y5J3 304 aa17.3■□□□□ 0.36
CCM2-205ENST00000472223 TBC1D3BA6NDS4 549 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 DCLK1O15075 740 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 TIMM44O43615 452 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 GNA12Q03113 381 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 PAFAH1B3Q15102 231 aaKnown RBP17.29■□□□□ 0.36
CCM2-205ENST00000472223 SLC9A4Q6AI14 798 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 BBS12Q6ZW61 710 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 ANKS1BQ7Z6G8 1248 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 LRRC49Q8IUZ0 686 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 AHI1Q8N157 1196 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 UMODL1-AS1Q8N2C9 162 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 CCDC26Q8TAB7 109 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 NSMCE1Q8WV22 266 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 UCMAQ8WVF2 138 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 P2RY13Q9BPV8 354 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 C2orf49Q9BVC5 232 aaPredicted RBP17.29■□□□□ 0.36
CCM2-205ENST00000472223 HEBP1Q9NRV9 189 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 ABCB8Q9NUT2 735 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 RNF14Q9UBS8 474 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 WNT16Q9UBV4 365 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 GGA2Q9UJY4 613 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 VPS28Q9UK41 221 aa17.29■□□□□ 0.36
CCM2-205ENST00000472223 MRPS17Q9Y2R5 130 aaKnown RBP17.29■□□□□ 0.36
CCM2-205ENST00000472223 COL6A3P12111 3177 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 GOLGA6L10A0A0M3HER8 536 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 OTOL1A6NHN0 477 aaPredicted RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 DFFAO00273 331 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 PPP1R12AO14974 1030 aaPredicted RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 FGGP02679 453 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 ATP5BP06576 529 aaKnown RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 PABPC1P11940 636 aaKnown RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 POLR2EP19388 210 aaKnown RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 CTHP32929 405 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 IRAK1P51617 712 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 PRKCQQ04759 706 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 SULT2A1Q06520 285 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 GRSF1Q12849 480 aaKnown RBP eCLIP17.28■□□□□ 0.36
CCM2-205ENST00000472223 TUBB2AQ13885 445 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 PDK1Q15118 436 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 DCAF12L1Q5VU92 463 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 NCBP2-AS2Q69YL0 99 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 SLC13A5Q86YT5 568 aaPredicted RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 PQLC3Q8N755 202 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 PLD5Q8N7P1 536 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 HAUS1Q96CS2 278 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 UHRF1Q96T88 793 aaPredicted RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 TUBB2BQ9BVA1 445 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 ATP13A1Q9HD20 1204 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 HOMER3Q9NSC5 361 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 FBXO10Q9UK96 956 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 NEU3Q9UQ49 428 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 SLC27A6Q9Y2P4 619 aa17.28■□□□□ 0.36
CCM2-205ENST00000472223 SPTBN5Q9NRC6 3674 aaKnown RBP17.28■□□□□ 0.36
CCM2-205ENST00000472223 RASA4BC9J798 803 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 APOC4-APOC2K7ER74 178 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 PGRMC1O00264 195 aaKnown RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 RASA4O43374 803 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 ZNF500O60304 480 aaPredicted RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 ZNF189O75820 626 aaPredicted RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 URI1O94763 535 aaPredicted RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 APOC2P02655 101 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 NNMTP40261 264 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 CSKP41240 450 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 GRIA2P42262 883 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 SLC6A11P48066 632 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 GEMIN4P57678 1058 aaKnown RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 KDSRQ06136 332 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 LMAN2Q12907 356 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 MLF2Q15773 248 aaPredicted RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 FSCBQ5H9T9 825 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 CXorf57Q6NSI4 855 aaKnown RBP17.27■□□□□ 0.36
CCM2-205ENST00000472223 RETSATQ6NUM9 610 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 AADACL2Q6P093 401 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 ZNF852Q6ZMS4 543 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 TPRG1Q6ZUI0 275 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 ETFBKMTQ8IXQ9 262 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 ATPAF2Q8N5M1 289 aa17.27■□□□□ 0.36
CCM2-205ENST00000472223 CCNYQ8ND76 341 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms