RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 ZFATQ9P243 1243 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 VANGL2Q9ULK5 521 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 SF3B1O75533 1304 aaKnown RBP eCLIP15.38■□□□□ 0.05
UBXN11-213ENST00000472155 PTPRDP23468 1912 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 AP2A1O95782 977 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 MOCS2O96007 188 aaPredicted RBP15.38■□□□□ 0.05
UBXN11-213ENST00000472155 RPL9P32969 192 aaKnown RBP15.38■□□□□ 0.05
UBXN11-213ENST00000472155 SLC5A3P53794 718 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 IRF9Q00978 393 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 RIPK1Q13546 671 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 FASTKD1Q53R41 847 aaKnown RBP15.38■□□□□ 0.05
UBXN11-213ENST00000472155 CCSAPQ6IQ19 270 aaPredicted RBP15.38■□□□□ 0.05
UBXN11-213ENST00000472155 TREML1Q86YW5 311 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 TNS4Q8IZW8 715 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 TTC8Q8TAM2 541 aa15.38■□□□□ 0.05
UBXN11-213ENST00000472155 TMEM88BA6NKF7 163 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 FCHO1O14526 889 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 PRKAR2AP13861 404 aaKnown RBP15.37■□□□□ 0.05
UBXN11-213ENST00000472155 AQP5P55064 265 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 PDE1BQ01064 536 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 ZBTB16Q05516 673 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 GALNT2Q10471 571 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 MBTPS1Q14703 1052 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 RINLQ6ZS11 566 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 SCD5Q86SK9 330 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 TTC9BQ8N6N2 239 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 MTBPQ96DY7 904 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 PTCD3Q96EY7 689 aaKnown RBP15.37■□□□□ 0.05
UBXN11-213ENST00000472155 B3GALT6Q96L58 329 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 OXCT2Q9BYC2 517 aaPredicted RBP15.37■□□□□ 0.05
UBXN11-213ENST00000472155 DMAP1Q9NPF5 467 aaPredicted RBP15.37■□□□□ 0.05
UBXN11-213ENST00000472155 MPP6Q9NZW5 540 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 ZNF623O75123 536 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 HAUS5O94927 633 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 NMBRP28336 390 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 SWT1Q5T5J6 900 aaKnown RBP15.37■□□□□ 0.05
UBXN11-213ENST00000472155 C14orf80Q86SX3 495 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 DCLK2Q8N568 766 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 KCNV2Q8TDN2 545 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 CADM1Q9BY67 442 aaKnown RBP15.37■□□□□ 0.05
UBXN11-213ENST00000472155 TRPV6Q9H1D0 765 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 RNF186Q9NXI6 227 aa15.37■□□□□ 0.05
UBXN11-213ENST00000472155 MTO1Q9Y2Z2 717 aaKnown RBP15.37■□□□□ 0.05
UBXN11-213ENST00000472155 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 ARHGAP42A6NI28 874 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 M0QZQ0 153 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 KLF11O14901 512 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 ENTPD5O75356 428 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 SOAT2O75908 522 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 POLBP06746 335 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 FAM163BP0C2L3 166 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 FGF3P11487 239 aaPredicted RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 SERPINB9P50453 376 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 TUSC3Q13454 348 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 PCLAFQ15004 111 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 DDR2Q16832 855 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 ARL13BQ3SXY8 428 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 TIFABQ6ZNK6 161 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 C10orf107Q8IVU9 208 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 SCN4BQ8IWT1 228 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 ARHGAP12Q8IWW6 846 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 HDAC11Q96DB2 347 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 GBA3Q9H227 469 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 MKS1Q9NXB0 559 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 HCSTQ9UBK5 93 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 DNAJB4Q9UDY4 337 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 KPNA6O60684 536 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 SNNO75324 88 aaPredicted RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 PAGE1O75459 146 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 TGDSO95455 350 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 GRK4P32298 578 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 GRIK1P39086 918 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 TRIM71Q2Q1W2 868 aaKnown RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 PREPLQ4J6C6 727 aaPredicted RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 ANKRD20A4Q4UJ75 823 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 MBLAC2Q68D91 279 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 PAXIP1Q6ZW49 1069 aaPredicted RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 STRA8Q7Z7C7 330 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 SMC1BQ8NDV3 1235 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 ZNF398Q8TD17 642 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 LINC01599Q8WXQ3 324 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 EPAS1Q99814 870 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 TACO1Q9BSH4 297 aaKnown RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 ATXN3LQ9H3M9 355 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 CASS4Q9NQ75 786 aa15.36■□□□□ 0.05
UBXN11-213ENST00000472155 PRG3Q9Y2Y8 225 aaPredicted RBP15.36■□□□□ 0.05
UBXN11-213ENST00000472155 TNFRSF10BO14763 440 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 CA12O43570 354 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 PLIN3O60664 434 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 CYP11A1P05108 521 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 ERFP50548 548 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 FCGRTP55899 365 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 EIF4EBP2Q13542 120 aaPredicted RBP15.35■□□□□ 0.05
UBXN11-213ENST00000472155 WLSQ5T9L3 541 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 FSTL4Q6MZW2 842 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 CYS1Q717R9 158 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 KLHDC9Q8NEP7 349 aa15.35■□□□□ 0.05
UBXN11-213ENST00000472155 TEKT5Q96M29 485 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms