RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 CCNB1P14635 433 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 CNTN1Q12860 1018 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 COL9A3Q14050 684 aaPredicted RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 FBXO46Q6PJ61 603 aaPredicted RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 C2orf15Q8WU43 125 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 FAM111AQ96PZ2 611 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 PAFAH2Q99487 392 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 SHCBP1LQ9BZQ2 653 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 PABPC3Q9H361 631 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 PNMA8BQ9ULN7 279 aaPredicted RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 RAD51BO15315 384 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 MSI1O43347 362 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 TPBGLP0DKB5 382 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 PAPD7Q5XG87 772 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 LCLAT1Q6UWP7 414 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 SEMA3CQ99985 751 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 NEUROG2Q9H2A3 272 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 IKZF4Q9H2S9 585 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 MRPL46Q9H2W6 279 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 MANSC1Q9H8J5 431 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 XPNPEP1Q9NQW7 623 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 APPL1Q9UKG1 709 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 AGO1Q9UL18 857 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 GPSM3Q9Y4H4 160 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 DTNAQ9Y4J8 743 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TOPAZ1Q8N9V7 1692 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3DA0A087WVF3 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3IA0A087WXS9 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3EA0A087X179 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3KA0A087X1G2 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 GNG14A0A1W2PPG7 69 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3FA6NER0 549 aaPredicted RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3LB9A6J9 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 CCNT2O60583 730 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 PAGE1O75459 146 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3HP0C7X1 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 IL10P22301 178 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 GUCY1A3Q02108 690 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 MIIPQ5JXC2 388 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 LRRC38Q5VT99 294 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3GQ6DHY5 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3CQ6IPX1 549 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 TBC1D3Q8IZP1 549 aaPredicted RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 SH2D3CQ8N5H7 860 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 ZFP14Q9HCL3 533 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 ADAM21Q9UKJ8 722 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 MGAT4DA6NG13 374 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 USP12O75317 370 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 ENO1P06733 434 aaKnown RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 ESRRGP62508 458 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 CCDC85BQ15834 202 aaPredicted RBP12.5□□□□□ -0.41
IRF1-208ENST00000472045 FOXR2Q6PJQ5 311 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 FAM228AQ86W67 206 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 MAGEC3Q8TD91 643 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 CXorf40BQ96DE9 158 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 C17orf80Q9BSJ5 609 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 VIPAS39Q9H9C1 493 aa12.5□□□□□ -0.41
IRF1-208ENST00000472045 HNRNPCL2B2RXH8 293 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 HNRNPCL1O60812 293 aaKnown RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 SKAP2O75563 359 aaPredicted RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 TNNI3P19429 210 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 MARSP56192 900 aaKnown RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 HSP90AA5PQ58FG0 334 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 TMC5Q6UXY8 1006 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 RGS9BPQ6ZS82 235 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 FLCNQ8NFG4 579 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 MYOCQ99972 504 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 FZD8Q9H461 694 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 DUOX1Q9NRD9 1551 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 LRRC10BA6NIK2 292 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 H3BMM5 538 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 SOCS7O14512 581 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 DNALI1O14645 258 aaPredicted RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 MDM4O15151 490 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 FKBP9O95302 570 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ENO3P13929 434 aaPredicted RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 ELK3P41970 407 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ABL2P42684 1182 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 SERPINB4P48594 390 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 CCNG1P51959 295 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 AIF1P55008 147 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 HTRA3P83110 453 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 TCEA2Q15560 299 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 PDCD2Q16342 344 aaPredicted RBP12.49□□□□□ -0.41
IRF1-208ENST00000472045 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 FKBP9P1Q75LS8 142 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 FAM9CQ8IZT9 166 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 CFAP52Q8N1V2 620 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ZSWIM2Q8NEG5 633 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 OTULINQ96BN8 352 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 SPATA13Q96N96 652 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 ASB8Q9H765 288 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 CATSPERZQ9NTU4 200 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 GID8Q9NWU2 228 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 AHSPQ9NZD4 102 aa12.49□□□□□ -0.41
IRF1-208ENST00000472045 MPP6Q9NZW5 540 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms