RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CLEC4CQ8WTT0 213 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 STYXQ8WUJ0 223 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TMEM174Q8WUU8 243 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 OIT3Q8WWZ8 545 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 IP6K1Q92551 441 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TNIP3Q96KP6 325 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 ADAD1Q96M93 576 aaKnown RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 CTAGE1Q96RT6 745 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 MYD88Q99836 296 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 ZPBPQ9BS86 351 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 SF3B5Q9BWJ5 86 aaKnown RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 SORBS1Q9BX66 1292 aaKnown RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TMEM120AQ9BXJ8 343 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 FRMD8Q9BZ67 464 aaPredicted RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 ARHGAP39Q9C0H5 1083 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 MYLK2Q9H1R3 596 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 MAGEH1Q9H213 219 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 ARNT2Q9HBZ2 717 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 KRCC1Q9NPI7 259 aaPredicted RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 SIRT3Q9NTG7 399 aaPredicted RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 GEMIN8Q9NWZ8 242 aaKnown RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TBC1D14Q9P2M4 693 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 CDC23Q9UJX2 597 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 PCDHA7Q9UN72 937 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 SLC12A4Q9UP95 1085 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 LZTS1Q9Y250 596 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 TNFSF13BQ9Y275 285 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 COPG1Q9Y678 874 aaKnown RBP1.61□□□□□ -2.15
UBXN4-207ENST00000471246 LMTK3Q96Q04 1460 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 SCN5AQ14524 2016 aa1.61□□□□□ -2.15
UBXN4-207ENST00000471246 GAGE12JA6NER3 117 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 AGAP5A6NIR3 686 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 KCNJ18B7U540 433 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 SLC28A2O43868 658 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 LARGE1O95461 756 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 KLKB1P03952 638 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 TGFB3P10600 412 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 GYS1P13807 737 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 TNFRSF8P28908 595 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 PPM1AP35813 382 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 STAT1P42224 750 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 TECP42680 631 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 RFX2P48378 723 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ADPRHP54922 357 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 RBM6P78332 1123 aaKnown RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 RHAGQ02094 409 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 EGR4Q05215 589 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ZBTB16Q05516 673 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 BTKQ06187 659 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 GPR18Q14330 331 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 TRIM60Q495X7 471 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF628Q5EBL2 1059 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 Q5PR19 223 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF324BQ6AW86 544 aaPredicted RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 CCSAPQ6IQ19 270 aaPredicted RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 LIN54Q6MZP7 749 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ERAP2Q6P179 960 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 Q6ZTK2 550 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 CTU1Q7Z7A3 348 aaKnown RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 KLBQ86Z14 1044 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 SPATA2LQ8IUW3 424 aaPredicted RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 SYTL1Q8IYJ3 562 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 FAM186BQ8IYM0 893 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 SLC25A41Q8N5S1 370 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 RBMXL3Q8N7X1 1067 aaKnown RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 HMGB4Q8WW32 186 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 NEUROG1Q92886 237 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 TMEM41AQ96HV5 264 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 LDHAL6BQ9BYZ2 381 aaPredicted RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 DCLK3Q9C098 648 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 SLCO5A1Q9H2Y9 848 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 PLAC1Q9HBJ0 212 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ZNF304Q9HCX3 659 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ARFGAP3Q9NP61 516 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 OBP2BQ9NPH6 170 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 PNRC2Q9NPJ4 139 aaKnown RBP1.6□□□□□ -2.15
UBXN4-207ENST00000471246 RNF146Q9NTX7 359 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 ARL15Q9NXU5 204 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 NCKIPSDQ9NZQ3 722 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 SELENONQ9NZV5 590 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 MYO6Q9UM54 1294 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 CNTN6Q9UQ52 1028 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 PKP3Q9Y446 797 aa1.6□□□□□ -2.15
UBXN4-207ENST00000471246 A0A087WV62 115 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 TRBV5-7A0A0A0MS05 114 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 GOLGA6L3A6NEY3 463 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 LGALS16A8MUM7 142 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 INAFM1C9JVW0 142 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 GRM8O00222 908 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 SYT5O00445 386 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 RGS14O43566 566 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ACTL6BO94805 426 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 HEXIM1O94992 359 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 GAS8-AS1O95177 125 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 LCATP04180 440 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 LCKP06239 509 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ITGA2BP08514 1039 aa1.59□□□□□ -2.15
UBXN4-207ENST00000471246 ACAA1P09110 424 aaPredicted RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 IFIT2P09913 472 aaKnown RBP1.59□□□□□ -2.15
UBXN4-207ENST00000471246 CPA1P15085 419 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms