RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 CD248Q9HCU0 757 aa20.31■□□□□ 0.84
HDAC7-220ENST00000471235 OSGEPQ9NPF4 335 aa20.31■□□□□ 0.84
HDAC7-220ENST00000471235 OR51B4Q9Y5P0 310 aa20.31■□□□□ 0.84
HDAC7-220ENST00000471235 R4GN57 208 aa20.31■□□□□ 0.84
HDAC7-220ENST00000471235 THADAQ6YHU6 1953 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 SHROOM3Q8TF72 1996 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 TNRC6BQ9UPQ9 1833 aaKnown RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 TCRBV21S2A2A0A5A6 115 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 ASLP04424 464 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 ATP5BP06576 529 aaKnown RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 CYLC1P35663 651 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 CTSOP43234 321 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 NRLP54845 237 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 CA9Q16790 459 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 RNF219Q5W0B1 726 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 SDE2Q6IQ49 451 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 RWDD4Q6NW29 188 aaKnown RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 SETD3Q86TU7 594 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 WDR5BQ86VZ2 330 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 NLRP14Q86W24 1093 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 CPNE8Q86YQ8 564 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 TMTC1Q8IUR5 882 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 TMEM139Q8IV31 216 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 ZBTB44Q8NCP5 570 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 ERLEC1Q96DZ1 483 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 MYO19Q96H55 970 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 MRGPRX3Q96LB0 322 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 EPAS1Q99814 870 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 POLMQ9NP87 494 aaPredicted RBP20.3■□□□□ 0.84
HDAC7-220ENST00000471235 INTUQ9ULD6 942 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 USP18Q9UMW8 372 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 PCDHGA2Q9Y5H1 932 aa20.3■□□□□ 0.84
HDAC7-220ENST00000471235 MYO1FO00160 1098 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 CREB3O43889 395 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 LILRB5O75023 590 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 RHOQP17081 205 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 IL1R2P27930 398 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 OR1E1P30953 314 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 C6orf118Q5T5N4 469 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 ERMARDQ5T6L9 678 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 ANO7Q6IWH7 933 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 SERPINA13PQ6UXR4 307 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 RAD9BQ6WBX8 426 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 LONP2Q86WA8 852 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 RASSF3Q86WH2 238 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 MDGA1Q8NFP4 955 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 RFFLQ8WZ73 363 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 KCTD15Q96SI1 283 aaPredicted RBP20.29■□□□□ 0.84
HDAC7-220ENST00000471235 PSMB7Q99436 277 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 FEM1AQ9BSK4 669 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 TMEM245Q9H330 911 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 DHX35Q9H5Z1 703 aaKnown RBP20.29■□□□□ 0.84
HDAC7-220ENST00000471235 TMEM248Q9NWD8 314 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 ERVW-1Q9UQF0 538 aa20.29■□□□□ 0.84
HDAC7-220ENST00000471235 EIF3CLB5ME19 914 aaKnown RBP20.28■□□□□ 0.84
HDAC7-220ENST00000471235 MTA2O94776 668 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 PROSCO94903 275 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 NDUFA10O95299 355 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 HLA-EP13747 358 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 NBL1P41271 181 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 MAGEA1P43355 309 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 MAPKAPK2P49137 400 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 SLC25A11Q02978 314 aaKnown RBP20.28■□□□□ 0.84
HDAC7-220ENST00000471235 ZC3H14Q6PJT7 736 aaKnown RBP20.28■□□□□ 0.84
HDAC7-220ENST00000471235 PSTKQ8IV42 348 aaKnown RBP20.28■□□□□ 0.84
HDAC7-220ENST00000471235 RHOT2Q8IXI1 618 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 ZNF366Q8N895 744 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 SLC35G2Q8TBE7 412 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 EIF3CQ99613 913 aaKnown RBP20.28■□□□□ 0.84
HDAC7-220ENST00000471235 BAG1Q99933 345 aaPredicted RBP20.28■□□□□ 0.84
HDAC7-220ENST00000471235 MUC3BQ9H195 1237 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 GRPEL1Q9HAV7 217 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 NDFIP2Q9NV92 336 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 EBF1Q9UH73 591 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 VPS28Q9UK41 221 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 PLA2G4CQ9UP65 541 aa20.28■□□□□ 0.84
HDAC7-220ENST00000471235 RALGAPA1Q6GYQ0 2036 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 CCDC163A0A0D9SF12 145 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 GOLGA6L6A8MZA4 724 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 AXIN1O15169 862 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 SRPRAP08240 638 aaKnown RBP20.27■□□□□ 0.84
HDAC7-220ENST00000471235 GABRG2P18507 467 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 EPHB2P29323 1055 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 STK19P49842 368 aaPredicted RBP20.27■□□□□ 0.84
HDAC7-220ENST00000471235 TPI1P60174 286 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 ECT2LQ008S8 904 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 STARD3Q14849 445 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 SPA17Q15506 151 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 SMTNL2Q2TAL5 461 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 TXNRD3NBQ6F5E7 133 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 ZNF783Q6ZMS7 281 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 RTL3Q8N8U3 475 aaKnown RBP20.27■□□□□ 0.84
HDAC7-220ENST00000471235 DCAF4L2Q8NA75 395 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 OR7D4Q8NG98 312 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 HMGB4Q8WW32 186 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 PPP1R9BQ96SB3 815 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 PHOX2BQ99453 314 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 TPSD1Q9BZJ3 242 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 RETREG1Q9H6L5 497 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 ZWILCHQ9H900 591 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms