RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DLDP09622 509 aaKnown RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 PABPC1P11940 636 aaKnown RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 SKILP12757 684 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CD27P26842 260 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CLCN1P35523 988 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CTSKP43235 329 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CCT8P50990 548 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 BCAT1P54687 386 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 RPS14P62263 151 aaKnown RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CCZ1BP86790 482 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CCZ1P86791 482 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 SMAD1Q15797 465 aaKnown RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 TTC31Q49AM3 519 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 FNDC3BQ53EP0 1204 aaKnown RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 MPP7Q5T2T1 576 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 ADGRF1Q5T601 910 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CHST9Q7L1S5 443 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 CCDC170Q8IYT3 715 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 SCML4Q8N228 414 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 ZNF557Q8N988 423 aaPredicted RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 EPS8L1Q8TE68 723 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 GOLGA1Q92805 767 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 BIRC7Q96CA5 298 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 TMA16Q96EY4 203 aaKnown RBP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 ORAI3Q9BRQ5 295 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 ULBP1Q9BZM6 244 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 KCNF1Q9H3M0 494 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 DEF6Q9H4E7 631 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 HAUS4Q9H6D7 363 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 SGK2Q9HBY8 427 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 PRSS16Q9NQE7 514 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 ABCB8Q9NUT2 735 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 ARHGAP20Q9P2F6 1191 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 GGA2Q9UJY4 613 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 TSPAN16Q9UKR8 245 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 KIAA1257Q9ULG3 409 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.4□□□□□ -0.9
SF3A1-206ENST00000471037 APC2O95996 2303 aa9.4□□□□□ -0.9
SF3A1-206ENST00000471037 SMG1Q96Q15 3661 aaKnown RBP9.4□□□□□ -0.91
SF3A1-206ENST00000471037 A0A087WV48 116 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 DFNA5O60443 496 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 DNTTP04053 509 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 ATP5BP06576 529 aaKnown RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 CYP11B1P15538 503 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 GNA15P30679 374 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 CYLC1P35663 651 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 EIF4A3P38919 411 aaKnown RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 ADIGQ0VDE8 80 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 BST2Q10589 180 aaKnown RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 GOLGA7BQ2TAP0 167 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 SGO2Q562F6 1265 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 BSPRYQ5W0U4 402 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 MBLAC2Q68D91 279 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 ZNF776Q68DI1 518 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 USP30Q70CQ3 517 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 SLC47A2Q86VL8 602 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 SCUBE3Q8IX30 993 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 ZNF366Q8N895 744 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 RNF139Q8WU17 664 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 KCTD13Q8WZ19 329 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 CCDC42Q96M95 316 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 CHP1Q99653 195 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 SYT11Q9BT88 431 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 RSPH9Q9H1X1 276 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 NHEJ1Q9H9Q4 299 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 LRRC4Q9HBW1 653 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 ABCC13Q9NSE7 274 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 HESX1Q9UBX0 185 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 SUN2Q9UH99 717 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 NOCTQ9UK39 431 aaKnown RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 SCML1Q9UN30 329 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 COL5A1P20908 1838 aaPredicted RBP9.39□□□□□ -0.91
SF3A1-206ENST00000471037 LOC400499M0QZD8 3231 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 ACACAQ13085 2346 aa9.39□□□□□ -0.91
SF3A1-206ENST00000471037 IGSF10Q6WRI0 2623 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 TRABD2BA6NFA1 517 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 SOWAHDA6NJG2 315 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 YJEFN3A6XGL0 299 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 C10orf142B7Z368 130 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 E7ENQ6 273 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 H0Y8X5 98 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 IRAK2O43187 625 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 MSI1O43347 362 aaKnown RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 THAP12O43422 761 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 MED7O43513 233 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 AKR1B10O60218 316 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 FSBPO95073 299 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 IPO7O95373 1038 aaKnown RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 IGLV3-27P01718 113 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 IGHV4-34P06331 123 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 PLEKP08567 350 aaPredicted RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 SETSIPP0DME0 302 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 VDRP11473 427 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 TNFAIP3P21580 790 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 CD70P32970 193 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 SGSHP51688 502 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 DAOAP59103 153 aa9.38□□□□□ -0.91
SF3A1-206ENST00000471037 RACK1P63244 317 aaKnown RBP9.38□□□□□ -0.91
SF3A1-206ENST00000471037 CDR2Q01850 454 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms