RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 GPR174Q9BXC1 333 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 TMEM74BQ9NUR3 256 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 WSB2Q9NYS7 404 aaPredicted RBP16.16■□□□□ 0.18
HDAC6-218ENST00000470942 SLCO3A1Q9UIG8 710 aa16.16■□□□□ 0.18
HDAC6-218ENST00000470942 C2CD4BA6NLJ0 364 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 TMCO5BA8MYB1 307 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 E9PAM4 449 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 SLC30A4O14863 429 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 RNASEH1O60930 286 aaKnown RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 SIN3BO75182 1162 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ENDOD1O94919 500 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 DNTTP04053 509 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 GPD1P21695 349 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 RFC1P35251 1148 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 STK19P49842 368 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 PLK1P53350 603 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 GSCP56915 257 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 UBASH3AP57075 661 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 RPS14P62263 151 aaKnown RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 C1QBPQ07021 282 aaKnown RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ARL13BQ3SXY8 428 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 RAB6CQ53S08 254 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ALFQ53S48 1182 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 TRIM61Q5EBN2 209 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ACBD5Q5T8D3 534 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 SH3PXD2AQ5TCZ1 1133 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 STPG1Q5TH74 334 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ZNF776Q68DI1 518 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ACAD10Q6JQN1 1059 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 DNAJC24Q6P3W2 148 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 WDR59Q6PJI9 974 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 MON1BQ7L1V2 547 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 BNIPLQ7Z465 357 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 SLC41A1Q8IVJ1 513 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 C3orf20Q8ND61 904 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 FOXJ1Q92949 421 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ZNF419Q96HQ0 510 aaPredicted RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 HAPLN3Q96S86 360 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 EDEM2Q9BV94 578 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 NUP58Q9BVL2 599 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 NUSAP1Q9BXS6 441 aaKnown RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 RAB6CQ9H0N0 254 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 MUC3BQ9H195 1237 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 MPP6Q9NZW5 540 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 NYNRINQ9P2P1 1898 aaKnown RBP16.15■□□□□ 0.18
HDAC6-218ENST00000470942 SLC25A13Q9UJS0 675 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 VPS28Q9UK41 221 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 PILRBQ9UKJ0 227 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 ADAMTS9Q9P2N4 1935 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 LAMA1P25391 3075 aa16.15■□□□□ 0.18
HDAC6-218ENST00000470942 EDDM13A0A1B0GTR0 161 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 TARSL2A2RTX5 802 aaKnown RBP16.14■□□□□ 0.17
HDAC6-218ENST00000470942 DCDC2BA2VCK2 349 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 ANKRD62A6NC57 917 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 SIGLEC16A6NMB1 481 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 DRGXA6NNA5 263 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 MEI4A8MW99 385 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 CFIP05156 583 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 RHOCP08134 193 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 PTPN9P43378 593 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 IRX4P78413 519 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 NUMA1Q14980 2115 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 SYCP2LQ5T4T6 812 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 IL31Q6EBC2 164 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 LRSAM1Q6UWE0 723 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 ERMP1Q7Z2K6 904 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 ZNF683Q8IZ20 524 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 MCOLN2Q8IZK6 566 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 OR52K2Q8NGK3 314 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 GANCQ8TET4 914 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 FAM172AQ8WUF8 416 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 FEM1AQ9BSK4 669 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 EDEM3Q9BZQ6 932 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 HAUS4Q9H6D7 363 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 TBC1D30Q9Y2I9 924 aa16.14■□□□□ 0.17
HDAC6-218ENST00000470942 ADRA1BP35368 520 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 LIMK1P53667 647 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 ZBTB16Q05516 673 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 KLHL30Q0D2K2 578 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 DUOXA1Q1HG43 343 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 TTC31Q49AM3 519 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-218ENST00000470942 ACCSLQ4AC99 568 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 WDR45BQ5MNZ6 344 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 C9orf64Q5T6V5 341 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 PPP1R2P3Q6NXS1 205 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 DCUN1D2Q6PH85 259 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 STRADAQ7RTN6 431 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 TFAP2DQ7Z6R9 452 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 CEP76Q8TAP6 659 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 ALG14Q96F25 216 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 RSPH9Q9H1X1 276 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-218ENST00000470942 TAS2R14Q9NYV8 317 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 AIPL1Q9NZN9 384 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 EVLQ9UI08 416 aaPredicted RBP16.13■□□□□ 0.17
HDAC6-218ENST00000470942 NCKAP1Q9Y2A7 1128 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 DCHS1Q96JQ0 3298 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 ITIH6Q6UXX5 1313 aa16.13■□□□□ 0.17
HDAC6-218ENST00000470942 IGLV3-10A0A075B6K4 115 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 LNP1A1A4G5 178 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 IGLV3-19P01714 112 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms