RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 OLIG2Q13516 323 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 KCNC3Q14003 757 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 IHHQ14623 411 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 MORF4L2Q15014 288 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PPM1LQ5SGD2 360 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 Q6ZNB5 142 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ZNF534Q76KX8 674 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ITIH5Q86UX2 942 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CHSY1Q86X52 802 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 IGDCC3Q8IVU1 814 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 LGI2Q8N0V4 545 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 UMODL1-AS1Q8N2C9 162 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 C12orf76Q8N812 135 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 SPATA13Q96N96 652 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CDK5RAP1Q96SZ6 601 aaKnown RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ZYG11BQ9C0D3 744 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 NACA2Q9H009 215 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ATXN3LQ9H3M9 355 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 VIPAS39Q9H9C1 493 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 RAB6BQ9NRW1 208 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 UXTQ9UBK9 157 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CDH22Q9UJ99 828 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 STOML2Q9UJZ1 356 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 SHOC2Q9UQ13 582 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CPQQ9Y646 472 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 A0A0D9SEW6 157 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 DFFAO00273 331 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 RHOP08100 348 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 HTR7P34969 479 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ACVRL1P37023 503 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 MAGEA6P43360 314 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PAPOLAP51003 745 aaKnown RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 KPNA1P52294 538 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PMS2P54278 862 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 COG7P83436 770 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 SLC29A2Q14542 456 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 KYNUQ16719 465 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CAND1Q86VP6 1230 aaKnown RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PPIL6Q8IXY8 311 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 UHMK1Q8TAS1 419 aaKnown RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CCHCR1Q8TD31 782 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PLD4Q96BZ4 506 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 LRRC45Q96CN5 670 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 HMCESQ96FZ2 354 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 C9orf72Q96LT7 481 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ZSWIM3Q96MP5 696 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 RPRD1AQ96P16 312 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 RBM15Q96T37 977 aaKnown RBP eCLIP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PABPC3Q9H361 631 aaKnown RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CDC42EP4Q9H3Q1 356 aaKnown RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 CATSPERBQ9H7T0 1116 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PLAC1Q9HBJ0 212 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 SEPT10Q9P0V9 454 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 PLAAQ9Y263 795 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ACTL7AQ9Y615 435 aa8.54□□□□□ -1.04
GTF3A-206ENST00000470606 ZFP37Q9Y6Q3 630 aaPredicted RBP8.54□□□□□ -1.04
GTF3A-206ENST00000470606 J3KR12 359 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 PPP1R12AO14974 1030 aaPredicted RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 ZBTB24O43167 697 aaPredicted RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 RIPK2O43353 540 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 APRTP07741 180 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 PSMB4P28070 264 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 SERPINB6P35237 376 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 HARS2P49590 506 aaKnown RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 FAM193AP78312 1265 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 SLC7A9P82251 487 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 ZNF844Q08AG5 666 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 TEAD2Q15562 447 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 PABPC1LQ4VXU2 614 aaKnown RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 PRSS36Q5K4E3 855 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 ADGRF1Q5T601 910 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 BZW1Q7L1Q6 419 aaKnown RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 GRASPQ7Z6J2 395 aaPredicted RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 TADA2BQ86TJ2 420 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 RELL1Q8IUW5 271 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 CCDC13Q8IYE1 715 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 UBLCP1Q8WVY7 318 aaPredicted RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 AZIN2Q96A70 460 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 ARL8AQ96BM9 186 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 TSGA13Q96PP4 275 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 SH3GL2Q99962 352 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 TRIM56Q9BRZ2 755 aaKnown RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 FAM129AQ9BZQ8 928 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 ASAH2Q9NR71 780 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 NINJ2Q9NZG7 142 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 PAK5Q9P286 719 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 MTRF1LQ9UGC7 380 aaKnown RBP8.53□□□□□ -1.04
GTF3A-206ENST00000470606 SLC12A6Q9UHW9 1150 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 RAD54BQ9Y620 910 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 MYLKQ15746 1914 aa8.53□□□□□ -1.04
GTF3A-206ENST00000470606 CCDC195A0A1B0GUA6 201 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 GOLGA6BA6NDN3 693 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 RASA4BC9J798 803 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 E7ESA3 106 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 NCAM2O15394 837 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 RASA4O43374 803 aa8.52□□□□□ -1.04
GTF3A-206ENST00000470606 TSPAN3O60637 253 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms