RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 A0A0D9SEW6 157 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 NEDD8-MDP1E9PL57 170 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 APOC4-APOC2K7ER74 178 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 PGRMC1O00264 195 aaKnown RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 TRIM24O15164 1050 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 CACNG3O60359 315 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 NFATC1O95644 943 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 APOC2P02655 101 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 CYBBP04839 570 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 ADH5P11766 374 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 MZF1P28698 734 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 OR1E1P30953 314 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 NR2C2P49116 596 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 NDST2P52849 883 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 OTUD4Q01804 1114 aaKnown RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 GAD2Q05329 585 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 MESP2Q0VG99 397 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 ZNF177Q13360 481 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 TUBB2AQ13885 445 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 NOMO1Q15155 1222 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 CYP1B1Q16678 543 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 WHAMMP3Q1A5X7 153 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 ANO4Q32M45 955 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 IER5LQ5T953 404 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 KIAA0907Q7Z7F0 614 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 SETD3Q86TU7 594 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 YAF2Q8IY57 180 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 CARNMT1Q8N4J0 409 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 CCDC33Q8N5R6 958 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 LRRN4Q8WUT4 740 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 C1orf54Q8WWF1 131 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 ATG4AQ8WYN0 398 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 ATP2A3Q93084 1043 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 HAUS1Q96CS2 278 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 HMCESQ96FZ2 354 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 FAM118BQ9BPY3 351 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 TUBB2BQ9BVA1 445 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 AP1M1Q9BXS5 423 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 TRPV5Q9NQA5 729 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 PRKAG3Q9UGI9 489 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 INTS6Q9UL03 887 aaKnown RBP11.55□□□□□ -0.56
SREBF1-209ENST00000470247 F5P12259 2224 aa11.55□□□□□ -0.56
SREBF1-209ENST00000470247 CHD5Q8TDI0 1954 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 ILVBLA1L0T0 632 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 SHISA7A6NL88 538 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 RASA4BC9J798 803 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 RASA4O43374 803 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 ADH1CP00326 375 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 HLA-FP30511 346 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 CD70P32970 193 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 GJA4P35212 333 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 ACVRL1P37023 503 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 OPRD1P41143 372 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 SLC6A11P48066 632 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 PLK1P53350 603 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 YBEYP58557 167 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-209ENST00000470247 GNA12Q03113 381 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 GALNT2Q10471 571 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 LMAN2Q12907 356 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 OASLQ15646 514 aaKnown RBP11.54□□□□□ -0.56
SREBF1-209ENST00000470247 CCNG2Q16589 344 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 NAIF1Q69YI7 327 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-209ENST00000470247 DRICH1Q6PGQ1 229 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-209ENST00000470247 ARHGAP36Q6ZRI8 547 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 B4GALNT4Q76KP1 1039 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 MFN1Q8IWA4 741 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 PHTF2Q8N3S3 785 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.54□□□□□ -0.56
SREBF1-209ENST00000470247 NAT16Q8N8M0 369 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 OR7D4Q8NG98 312 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 TTC8Q8TAM2 541 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 ARHGEF2Q92974 986 aaKnown RBP11.54□□□□□ -0.56
SREBF1-209ENST00000470247 FEM1AQ9BSK4 669 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 ACE2Q9BYF1 805 aaPredicted RBP11.54□□□□□ -0.56
SREBF1-209ENST00000470247 SLC2A11Q9BYW1 496 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 MAGEH1Q9H213 219 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 BRD9Q9H8M2 597 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 DONSONQ9NYP3 566 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 DNPEPQ9ULA0 475 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 HEY1Q9Y5J3 304 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 RAD54BQ9Y620 910 aa11.54□□□□□ -0.56
SREBF1-209ENST00000470247 TYW5A2RUC4 315 aaKnown RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 H0Y626 953 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 KRIT1O00522 736 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 LIASO43766 372 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 NARSO43776 548 aaKnown RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 RAMP2O60895 175 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 TULP3O75386 442 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 ZMPSTE24O75844 475 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 CD160O95971 181 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 PEX11BO96011 259 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 RHOCP08134 193 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 SERPINB6P35237 376 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 CSKP41240 450 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 GARSP41250 739 aaKnown RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 PAFAH1B1P43034 410 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 PAPOLAP51003 745 aaKnown RBP11.53□□□□□ -0.56
SREBF1-209ENST00000470247 XRCC4Q13426 336 aa11.53□□□□□ -0.56
SREBF1-209ENST00000470247 SERINC3Q13530 473 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms