RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 FRMD1Q8N878 549 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 FAM71BQ8TC56 605 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 DDI1Q8WTU0 396 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 FAM149B1Q96BN6 582 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 ZC3H10Q96K80 434 aaKnown RBP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.2■□□□□ 0.5
MRPL28-208ENST00000469744 CACNA2D2Q9NY47 1150 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 TJP2Q9UDY2 1190 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 FBXO10Q9UK96 956 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 STARD13Q9Y3M8 1113 aa18.2■□□□□ 0.5
MRPL28-208ENST00000469744 NUP205Q92621 2012 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 GOLGA6L10A0A0M3HER8 536 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 WASH3PC4AMC7 463 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 E5RJQ4 531 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 RAD51CO43502 376 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 MED7O43513 233 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 GDF9O60383 454 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 FBXO21O94952 628 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 CYBBP04839 570 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 FYNP06241 537 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 GLI1P08151 1106 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 COMTP21964 271 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 CTNNA1P35221 906 aaKnown RBP18.19■□□□□ 0.5
MRPL28-208ENST00000469744 PEX5P50542 639 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 DCAF12L1Q5VU92 463 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 KIAA1211LQ6NV74 962 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 TRMT11Q7Z4G4 463 aaKnown RBP18.19■□□□□ 0.5
MRPL28-208ENST00000469744 PHF13Q86YI8 300 aaPredicted RBP18.19■□□□□ 0.5
MRPL28-208ENST00000469744 PASD1Q8IV76 773 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 FAM217AQ8IXS0 508 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 MREGQ8N565 214 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 ADAM32Q8TC27 787 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 EPB41L5Q9HCM4 733 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 PCDHA3Q9Y5H8 950 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 RAD54BQ9Y620 910 aa18.19■□□□□ 0.5
MRPL28-208ENST00000469744 GON4LQ3T8J9 2241 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.18■□□□□ 0.5
MRPL28-208ENST00000469744 A0A1W2PQF6 199 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 SART1O43290 800 aaKnown RBP18.18■□□□□ 0.5
MRPL28-208ENST00000469744 NCAM1P13591 858 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 SLC1A1P43005 524 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 SGSHP51688 502 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 RNASE9P60153 205 aaKnown RBP18.18■□□□□ 0.5
MRPL28-208ENST00000469744 GUCY2DQ02846 1103 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 MESDQ14696 234 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 TERF2Q15554 542 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 HSP90B2PQ58FF3 399 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 ALS2CLQ60I27 953 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 KLHL7Q8IXQ5 586 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 KCNV2Q8TDN2 545 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 LOXL4Q96JB6 756 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 DLL3Q9NYJ7 618 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 LCMT1Q9UIC8 334 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 CDV3Q9UKY7 258 aaKnown RBP18.18■□□□□ 0.5
MRPL28-208ENST00000469744 NAALADL1Q9UQQ1 740 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 SLC27A6Q9Y2P4 619 aa18.18■□□□□ 0.5
MRPL28-208ENST00000469744 GOLGA6L7A0A1B0GV03 622 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 PAPSS1O43252 624 aaPredicted RBP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 FGGP02679 453 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 GABRG2P18507 467 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 HOXD9P28356 352 aaPredicted RBP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 MPLP40238 635 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 NSFP46459 744 aaKnown RBP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 RPL34P49207 117 aaKnown RBP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 TBX4P57082 545 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 CREB5Q02930 508 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 PUM1Q14671 1186 aaKnown RBP eCLIP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 SYPL2Q5VXT5 272 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 RFWD3Q6PCD5 774 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 SND1Q7KZF4 910 aaKnown RBP eCLIP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 MON1BQ7L1V2 547 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 DQX1Q8TE96 717 aaKnown RBP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 CASKIN2Q8WXE0 1202 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 SEC14L1Q92503 715 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 ALG3Q92685 438 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 PIWIL1Q96J94 861 aaKnown RBP18.17■□□□□ 0.5
MRPL28-208ENST00000469744 RUNDC3BQ96NL0 473 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 SLC4A5Q9BY07 1137 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 SLC6A17Q9H1V8 727 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 RXFP3Q9NSD7 469 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 PLXND1Q9Y4D7 1925 aa18.17■□□□□ 0.5
MRPL28-208ENST00000469744 FAM170AA1A519 330 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 FAM187AA6NFU0 413 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 PRR5-ARHGAP8B1AHC4 643 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 H3BQF6 201 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 RHOBTB1O94844 696 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 LSM8O95777 96 aaKnown RBP18.16■□□□□ 0.5
MRPL28-208ENST00000469744 IGLV3-27P01718 113 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 P2RY2P41231 377 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 ACADSBP45954 432 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 NOMO3P69849 1222 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 ARHGAP8P85298 464 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 PDCLQ13371 301 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 MPPE1Q53F39 396 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 ADGRF1Q5T601 910 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 SEL1L2Q5TEA6 688 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 PMS2CLQ68D20 193 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 TCEAL6Q6IPX3 200 aa18.16■□□□□ 0.5
MRPL28-208ENST00000469744 SDE2Q6IQ49 451 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms