RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 SBK3P0C264 359 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 TYRP14679 529 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 CD52P31358 61 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 STAT6P42226 847 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 RARRES1P49788 294 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 GPC3P51654 580 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 RABGGTBP53611 331 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 WDR5P61964 334 aaKnown RBP6.77□□□□□ -1.33
PTCD3-208ENST00000469585 ADAM17P78536 824 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 RNASELQ05823 741 aaKnown RBP6.77□□□□□ -1.33
PTCD3-208ENST00000469585 HLTFQ14527 1009 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTCD3-208ENST00000469585 MAPK6Q16659 721 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 DCAF17Q5H9S7 520 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-208ENST00000469585 FBXO47Q5MNV8 452 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 C9orf50Q5SZB4 431 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 MARCH8Q5T0T0 291 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 NOTUMQ6P988 496 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 DRICH1Q6PGQ1 229 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-208ENST00000469585 NPNTQ6UXI9 565 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 HTR3DQ70Z44 454 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 SLC24A5Q71RS6 500 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 ANO5Q75V66 913 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 MAEAQ7L5Y9 396 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 CATSPER3Q86XQ3 398 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 HERC6Q8IVU3 1022 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 CEP57L1Q8IYX8 460 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 KIAA0319LQ8IZA0 1049 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 DEFB123Q8N688 67 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 RNF169Q8NCN4 708 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 CNNM3Q8NE01 707 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 URGCPQ8TCY9 931 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 PIGOQ8TEQ8 1089 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 EDAQ92838 391 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 TMEM143Q96AN5 459 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 BICD1Q96G01 975 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 HSD17B14Q9BPX1 270 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 MRPL9Q9BYD2 267 aaKnown RBP6.77□□□□□ -1.33
PTCD3-208ENST00000469585 B3GNT5Q9BYG0 378 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 POLR3FQ9H1D9 316 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-208ENST00000469585 UBN1Q9NPG3 1134 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 LMBRD1Q9NUN5 540 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 TANC1Q9C0D5 1861 aa6.77□□□□□ -1.33
PTCD3-208ENST00000469585 LTBP2Q14767 1821 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 LOXHD1Q8IVV2 1947 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 CAPN14A8MX76 684 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 PRR5-ARHGAP8B1AHC4 643 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 FAM227AF5H4B4 570 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 GRM6O15303 877 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 NBNO60934 754 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 PPP6R2O75170 966 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 CHRNA1P02708 482 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 CD1AP06126 327 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 FTH1P19P0C7X4 201 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 DARSP14868 501 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 ACO1P21399 889 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 ITGB8P26012 769 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 MARCKSP29966 332 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 HHEXQ03014 270 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 POU5F1BQ06416 359 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 LAMTOR4Q0VGL1 99 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 BTG3Q14201 252 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 DHX8Q14562 1220 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 LPIN1Q14693 890 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 TRIM71Q2Q1W2 868 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 ANO6Q4KMQ2 910 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 PABPC1LQ4VXU2 614 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 NAIF1Q69YI7 327 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 FAM109BQ6ICB4 259 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 ZNF529Q6P280 563 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 FAM90A1Q86YD7 464 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 TTC9BQ8N6N2 239 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 IQUBQ8NA54 791 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 IL17RDQ8NFM7 739 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 ZFP28Q8NHY6 868 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 PRPF31Q8WWY3 499 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 TFAP2CQ92754 450 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 CCDC51Q96ER9 411 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 RPS6KC1Q96S38 1066 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 ADAM2Q99965 735 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 CUEDC2Q9H467 287 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 DHX33Q9H6R0 707 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 MAGEF1Q9HAY2 307 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 PRMT7Q9NVM4 692 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 PNPOQ9NVS9 261 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 FBXO34Q9NWN3 711 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 STK39Q9UEW8 545 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 PADI3Q9ULW8 664 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 ST3GAL5Q9UNP4 418 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 CLCA2Q9UQC9 943 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 MTMR6Q9Y217 621 aa6.76□□□□□ -1.33
PTCD3-208ENST00000469585 SRPRBQ9Y5M8 271 aaKnown RBP6.76□□□□□ -1.33
PTCD3-208ENST00000469585 A0A087WZ62 844 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 TCRBV7S2A1N4TA0A589 114 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 FSD2A1L4K1 749 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 K7ERI5 159 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 K7ESM1 405 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 TPP1O14773 563 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 MED24O75448 989 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 GJB5O95377 273 aa6.75□□□□□ -1.33
PTCD3-208ENST00000469585 HRGP04196 525 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms