RNA–Protein interactions for RNA: ENST00000469054.1

VPS13D-204, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-204ENST00000469054 TAS2R40P59535 323 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 TPI1P60174 286 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 CCZ1BP86790 482 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 CCZ1P86791 482 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-204ENST00000469054 KIF5AQ12840 1032 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 E2F5Q15329 346 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 DPYSL2Q16555 572 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 PPP6R3Q5H9R7 873 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-204ENST00000469054 EOGTQ5NDL2 527 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 ZNF783Q6ZMS7 281 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 SYT13Q7L8C5 426 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 CHPFQ8IZ52 775 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 APCDD1Q8J025 514 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 CCDC33Q8N5R6 958 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 OR52K2Q8NGK3 314 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 SORCS1Q8WY21 1168 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 HSPH1Q92598 858 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 TTC17Q96AE7 1141 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 ALG14Q96F25 216 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 PDLIM2Q96JY6 352 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 KCTD15Q96SI1 283 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-204ENST00000469054 ACOX2Q99424 681 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 FEM1AQ9BSK4 669 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 CATSPERBQ9H7T0 1116 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 ZDHHC4Q9NPG8 344 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 C2orf42Q9NWW7 574 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 THAP10Q9P2Z0 257 aaPredicted RBP12.28□□□□□ -0.44
VPS13D-204ENST00000469054 SALL4Q9UJQ4 1053 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 OR51B4Q9Y5P0 310 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 ADGRG1Q9Y653 693 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 DUSP10Q9Y6W6 482 aa12.28□□□□□ -0.44
VPS13D-204ENST00000469054 ILVBLA1L0T0 632 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 WASH4PA8MWX3 477 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 SGK1O00141 431 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 FGF10O15520 208 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 GALR2O43603 387 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 BUB1O43683 1085 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 ADAM23O75077 832 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 PAPSS2O95340 614 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 KRT7P08729 469 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 DLDP09622 509 aaKnown RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 COMTP21964 271 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 NTSR1P30989 418 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 HCAR3P49019 387 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 MAPKAPK2P49137 400 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 NAP1L1P55209 391 aaKnown RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 SATB1Q01826 763 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 SULT2A1Q06520 285 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 ATP13A4Q4VNC1 1196 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 RNF219Q5W0B1 726 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 SDE2Q6IQ49 451 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 RFX8Q6ZV50 586 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 MAML2Q8IZL2 1156 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 RTL3Q8N8U3 475 aaKnown RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 TPCN2Q8NHX9 752 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 CYB5D2Q8WUJ1 264 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 PRRX2Q99811 253 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 MUC3BQ9H195 1237 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 NDFIP2Q9NV92 336 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 POLR3BQ9NW08 1133 aaPredicted RBP12.27□□□□□ -0.45
VPS13D-204ENST00000469054 CACNA2D2Q9NY47 1150 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 DONSONQ9NYP3 566 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 DNAI1Q9UI46 699 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 MMP17Q9ULZ9 603 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 PLA2G4CQ9UP65 541 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 ALG6Q9Y672 507 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 TRIOO75962 3097 aa12.27□□□□□ -0.45
VPS13D-204ENST00000469054 A0A0D9SEW6 157 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 A0A0U1RQJ8 604 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 H3BRJ5 948 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 DAPK3O43293 454 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 ASLP04424 464 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 PTMAP06454 111 aaKnown RBP12.26□□□□□ -0.45
VPS13D-204ENST00000469054 GOT1P17174 413 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 GJC1P36383 396 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 ARL4AP40617 200 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 IL12RB1P42701 662 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 WASP42768 502 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 NUMBP49757 651 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 ARSEP51690 589 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 CDH6P55285 790 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 GNA12Q03113 381 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 ENPP2Q13822 863 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 KRT81Q14533 505 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 ZNF234Q14588 700 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 ANGPT1Q15389 498 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 CRY1Q16526 586 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 PTPRNQ16849 979 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 LRRC38Q5VT99 294 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 C11orf63Q6NUN7 778 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 POLNQ7Z5Q5 900 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 ATRIPQ8WXE1 791 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 GABRG3Q99928 467 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 PCDH18Q9HCL0 1135 aa12.26□□□□□ -0.45
VPS13D-204ENST00000469054 PRMT8Q9NR22 394 aaPredicted RBP12.26□□□□□ -0.45
VPS13D-204ENST00000469054 CWC15Q9P013 229 aaKnown RBP12.26□□□□□ -0.45
VPS13D-204ENST00000469054 VPS28Q9UK41 221 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms