RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 GALNT4Q8N4A0 578 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 Q8N9P0 234 aaPredicted RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 MASTLQ96GX5 879 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 ZNF845Q96IR2 970 aaPredicted RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 HIC2Q96JB3 615 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 PHF7Q9BWX1 381 aaPredicted RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 QTRT1Q9BXR0 403 aaKnown RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 STN1Q9H668 368 aaKnown RBP5.62□□□□□ -1.51
LSM5-209ENST00000468872 WDR26Q9H7D7 661 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 JMJD4Q9H9V9 463 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 IL21RQ9HBE5 538 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 ASNSD1Q9NWL6 643 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 TBX20Q9UMR3 447 aa5.62□□□□□ -1.51
LSM5-209ENST00000468872 B4E171 279 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 GCATO75600 419 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 TUBB4AP04350 444 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 ALDOCP09972 364 aaKnown RBP5.61□□□□□ -1.51
LSM5-209ENST00000468872 PRPH2P23942 346 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 KRT9P35527 623 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 TSPAN7P41732 249 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 DMWDQ09019 674 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 KLF9Q13886 244 aaPredicted RBP5.61□□□□□ -1.51
LSM5-209ENST00000468872 SUPT20HL1Q3ZLR7 823 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 LIPMQ5VYY2 423 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 SLC18B1Q6NT16 456 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 FAM180BQ6P0A1 224 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 SERPINA13PQ6UXR4 307 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.61□□□□□ -1.51
LSM5-209ENST00000468872 TSPYL6Q8N831 410 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 EXD3Q8N9H8 876 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 KCNJ9Q92806 393 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 RPL36ALQ969Q0 106 aaKnown RBP5.61□□□□□ -1.51
LSM5-209ENST00000468872 CCDC17Q96LX7 622 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 PAIP1Q9H074 479 aaKnown RBP5.61□□□□□ -1.51
LSM5-209ENST00000468872 ZHX3Q9H4I2 956 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 THAP1Q9NVV9 213 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 ARHGAP26Q9UNA1 814 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 GDAQ9Y2T3 454 aa5.61□□□□□ -1.51
LSM5-209ENST00000468872 HEMK1Q9Y5R4 338 aaPredicted RBP5.61□□□□□ -1.51
LSM5-209ENST00000468872 SIRT4Q9Y6E7 314 aaPredicted RBP5.61□□□□□ -1.51
LSM5-209ENST00000468872 NISCHQ9Y2I1 1504 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 BTBD19C9JJ37 291 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 CNTN5O94779 1100 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 TBX18O95935 607 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 RFPL3SP0C7P2 107 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 ARSAP15289 507 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 PSMC2P35998 433 aaKnown RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 PGM1P36871 562 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 GALNT2Q10471 571 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 KPNB1Q14974 876 aaKnown RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 ETFDHQ16134 617 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 C1orf122Q6ZSJ8 110 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 TCP11L2Q8N4U5 519 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 ENDOVQ8N8Q3 282 aaKnown RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 PNLDC1Q8NA58 520 aaKnown RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 LSM14AQ8ND56 463 aaKnown RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 ADPRHL1Q8NDY3 354 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 ADAMTS18Q8TE60 1221 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 ZUFSPQ96AP4 578 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 ZBTB10Q96DT7 871 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 RNFT2Q96EX2 444 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 FYTTD1Q96QD9 318 aaKnown RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 GATA5Q9BWX5 397 aaPredicted RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 HDHD5Q9BXW7 423 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 OSBPL5Q9H0X9 879 aaPredicted RBP5.6□□□□□ -1.51
LSM5-209ENST00000468872 ACAD9Q9H845 621 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 SFXN1Q9H9B4 322 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 PREBQ9HCU5 417 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 SMC4Q9NTJ3 1288 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 KLQ9UEF7 1012 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 CD207Q9UJ71 328 aa5.6□□□□□ -1.51
LSM5-209ENST00000468872 ANP32CO43423 234 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 IFIT1P09914 478 aaKnown RBP5.59□□□□□ -1.51
LSM5-209ENST00000468872 WEE2P0C1S8 567 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 TNNT1P13805 278 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 IDUAP35475 653 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 RXRGP48443 463 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 RUNDC3AQ59EK9 446 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 ACAD10Q6JQN1 1059 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 MTFR2Q6P444 385 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 VSTM1Q6UX27 236 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 LRRC8DQ7L1W4 858 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 TFAP2DQ7Z6R9 452 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 TBC1D1Q86TI0 1168 aaPredicted RBP5.59□□□□□ -1.51
LSM5-209ENST00000468872 RFX6Q8HWS3 928 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 SCN4BQ8IWT1 228 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 ZNF366Q8N895 744 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 TBC1D22AQ8WUA7 517 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 CELF1Q92879 486 aaKnown RBP5.59□□□□□ -1.51
LSM5-209ENST00000468872 ATP2A3Q93084 1043 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 RNF125Q96EQ8 232 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 RITA1Q96K30 269 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 ASB2Q96Q27 587 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 SENP7Q9BQF6 1050 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 CTDSP1Q9GZU7 261 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 NUAK2Q9H093 628 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 TAOK3Q9H2K8 898 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 CYP46A1Q9Y6A2 500 aa5.59□□□□□ -1.51
LSM5-209ENST00000468872 FAM90A7PA6NKC0 464 aa5.58□□□□□ -1.52
LSM5-209ENST00000468872 FAM90A22PA8MWA6 464 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms