RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 GKN1Q9NS71 199 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 DNMT3LQ9UJW3 386 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 ANAPC5Q9UJX4 755 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 SSX2IPQ9Y2D8 614 aa8.49□□□□□ -1.05
BRCA1-208ENST00000468300 EPOPA6NHQ4 379 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 MOSPD3O75425 235 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 STC2O76061 302 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 PEX11BO96011 259 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 SHBGP04278 402 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 HMBSP08397 361 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 CD53P19397 219 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 HTR7P34969 479 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ATP5C1P36542 298 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 GARSP41250 739 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 SGSHP51688 502 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ERVK-21P61565 698 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 SWT1Q5T5J6 900 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 MYLK4Q86YV6 388 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 CCHCR1Q8TD31 782 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 DEPDC1BQ8WUY9 529 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 TFB1MQ8WVM0 346 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 C17orf50Q8WW18 174 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 RSAD2Q8WXG1 361 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 HDAC11Q96DB2 347 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF512Q96ME7 567 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 PRICKLE1Q96MT3 831 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 EPAS1Q99814 870 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 HBS1LQ9Y450 684 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 C2orf16Q68DN1 1984 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 CLASP2O75122 1294 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 CD68P34810 354 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 UBE3AQ05086 875 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ZBTB17Q13105 803 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 FASTKD3Q14CZ7 662 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 MORF4L2Q15014 288 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 C11orf91Q3C1V1 193 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 SPDYCQ5MJ68 293 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 HECTD3Q5T447 861 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 STXBP5Q5T5C0 1151 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 TTC39BQ5VTQ0 682 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ALKBH2Q6NS38 261 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ADGRD2Q7Z7M1 963 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 KREMEN2Q8NCW0 462 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 OR52K2Q8NGK3 314 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 OR2W6PQ8NHA6 318 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 HTR3CQ8WXA8 447 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 TBC1D31Q96DN5 1066 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 CELF6Q96J87 481 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 LBHD1Q9BQE6 289 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 SLC39A8Q9C0K1 460 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 PLAC1Q9HBJ0 212 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 HCFC1R1Q9NWW0 138 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 STOML2Q9UJZ1 356 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 VANGL2Q9ULK5 521 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 TMCC3Q9ULS5 477 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ATP8A1Q9Y2Q0 1164 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 RAD54BQ9Y620 910 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 UNC80Q8N2C7 3258 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 BOLA2-SMG1P6H3BVE0 249 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 MAFKO60675 156 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 BANF1O75531 89 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 CSPG5O95196 566 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 PAPLNO95428 1278 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ADH1AP07327 375 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 C8AP07357 584 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 SLC2A3P11169 496 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 FOSL1P15407 271 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 PMS2P54278 862 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 EPHB3P54753 998 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 RAP1GAP2Q684P5 730 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 TXNDC8Q6A555 127 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 CDKL3Q8IVW4 592 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ZNF567Q8N184 647 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 TAB3Q8N5C8 712 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 RTL3Q8N8U3 475 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 RIN3Q8TB24 985 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 GDF15Q99988 308 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 PBX4Q9BYU1 374 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ETNK1Q9HBU6 452 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 ENTPD7Q9NQZ7 604 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 DNAJC17Q9NVM6 304 aaKnown RBP8.48□□□□□ -1.05
BRCA1-208ENST00000468300 TMEM248Q9NWD8 314 aa8.48□□□□□ -1.05
BRCA1-208ENST00000468300 SPDYE4A6NLX3 237 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 E7ESA3 106 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 RIPK2O43353 540 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 PTPN3P26045 913 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 PPP3CCP48454 512 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 EPHA5P54756 1037 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CAV1Q03135 178 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 KCNC3Q14003 757 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 ANKRD20A2Q5SQ80 823 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 ANKRD20A1Q5TYW2 823 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 ANKRD20A3Q5VUR7 823 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 Q6ZNB5 142 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CAND1Q86VP6 1230 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CIR1Q86X95 450 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 SUGP1Q8IWZ8 645 aaKnown RBP8.47□□□□□ -1.05
BRCA1-208ENST00000468300 PPIL6Q8IXY8 311 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 SCYL1Q96KG9 808 aa8.47□□□□□ -1.05
BRCA1-208ENST00000468300 CEP41Q9BYV8 373 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms