RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 LIMA1Q9UHB6 759 aaKnown RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 NOCTQ9UK39 431 aaKnown RBP19.66■□□□□ 0.74
COL7A1-207ENST00000467985 ADAMTS9Q9P2N4 1935 aa19.66■□□□□ 0.74
COL7A1-207ENST00000467985 TTC34A8MYJ7 566 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 GFPT2O94808 682 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 SOX5P35711 763 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 VASPP50552 380 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-207ENST00000467985 COPB1P53618 953 aaKnown RBP19.65■□□□□ 0.74
COL7A1-207ENST00000467985 JAM2P57087 298 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 SHC2P98077 582 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 ZNF252P-AS1Q0IIN9 211 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 OTUD1Q5VV17 481 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-207ENST00000467985 NAA35Q5VZE5 725 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 LRRC31Q6UY01 552 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 TRIM72Q6ZMU5 477 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 PIP4P1Q86T03 277 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 CIR1Q86X95 450 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-207ENST00000467985 GANCQ8TET4 914 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 CPA5Q8WXQ8 436 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 IGSF8Q969P0 613 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 C1orf74Q96LT6 269 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 SIK2Q9H0K1 926 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 MTG2Q9H4K7 406 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 C6orf106Q9H6K1 298 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-207ENST00000467985 EIF2B4Q9UI10 523 aaKnown RBP19.65■□□□□ 0.74
COL7A1-207ENST00000467985 SLCO3A1Q9UIG8 710 aa19.65■□□□□ 0.74
COL7A1-207ENST00000467985 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.65■□□□□ 0.74
COL7A1-207ENST00000467985 FRYQ5TBA9 3013 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 LRRC10BA6NIK2 292 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 LGALS16A8MUM7 142 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 GIPC1O14908 333 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 ADCY5O95622 1261 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 CDK11BP21127 795 aaKnown RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 MZF1P28698 734 aaPredicted RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 STAT1P42224 750 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 KLK7P49862 253 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 AFF3P51826 1226 aaKnown RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 CDH4P55283 916 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 CENPCQ03188 943 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 GRIK2Q13002 908 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 HNRNPDQ14103 355 aaKnown RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 ELAVL3Q14576 367 aaKnown RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 CST6Q15828 149 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 IL27RAQ6UWB1 636 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 DEFB124Q8NES8 71 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 NEK11Q8NG66 645 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 SNX19Q92543 992 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 RPL10LQ96L21 214 aaKnown RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 PCMTD1Q96MG8 357 aaPredicted RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 FEM1AQ9BSK4 669 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 NAT10Q9H0A0 1025 aaKnown RBP19.64■□□□□ 0.73
COL7A1-207ENST00000467985 OSGEPQ9NPF4 335 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 FBXL12Q9NXK8 326 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 SLC25A13Q9UJS0 675 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 FZD4Q9ULV1 537 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 TBC1D30Q9Y2I9 924 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 SIK3Q9Y2K2 1263 aa19.64■□□□□ 0.73
COL7A1-207ENST00000467985 GOLGA8SH3BPF8 625 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 ADH1BP00325 375 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 SYCP1Q15431 976 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 MMAAQ8IVH4 418 aaKnown RBP19.63■□□□□ 0.73
COL7A1-207ENST00000467985 C1orf216Q8TAB5 229 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 CNTNAP3BQ96NU0 1288 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 TBCBQ99426 244 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 OMDQ99983 421 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 ADAM33Q9BZ11 813 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 CNTNAP3Q9BZ76 1288 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 NLRC4Q9NPP4 1024 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 ADAMTS1Q9UHI8 967 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 TMEM59LQ9UK28 342 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 VPS28Q9UK41 221 aa19.63■□□□□ 0.73
COL7A1-207ENST00000467985 CER1O95813 267 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 CYP1A1P04798 512 aaPredicted RBP19.62■□□□□ 0.73
COL7A1-207ENST00000467985 ZNF18P17022 549 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 TFE3P19532 575 aaPredicted RBP19.62■□□□□ 0.73
COL7A1-207ENST00000467985 MMP8P22894 467 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 SLC8A1P32418 973 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 FLT3P36888 993 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 STK19P49842 368 aaPredicted RBP19.62■□□□□ 0.73
COL7A1-207ENST00000467985 UBXN1Q04323 297 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 NUMA1Q14980 2115 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 TEAD4Q15561 434 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 DSG4Q86SJ6 1040 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 C14orf80Q86SX3 495 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 SLC20A1Q8WUM9 679 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 PTPRN2Q92932 1015 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 BIRC7Q96CA5 298 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 ALG14Q96F25 216 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 ERGIC2Q96RQ1 377 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 HAPLN3Q96S86 360 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 FAM129BQ96TA1 746 aa19.62■□□□□ 0.73
COL7A1-207ENST00000467985 KMT2BQ9UMN6 2715 aaPredicted RBP19.61■□□□□ 0.73
COL7A1-207ENST00000467985 LRRC72A6NJI9 287 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 EPHB6O15197 1021 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 MID1O15344 667 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 ATP9BO43861 1147 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 GJB3O75712 270 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 RNASEH2AO75792 299 aaKnown RBP19.61■□□□□ 0.73
COL7A1-207ENST00000467985 FSBPO95073 299 aa19.61■□□□□ 0.73
COL7A1-207ENST00000467985 CD59P13987 128 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms