RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 CLCA2Q9UQC9 943 aa12.62□□□□□ -0.39
UBR4-211ENST00000467272 TLN1Q9Y490 2541 aaKnown RBP12.61□□□□□ -0.39
UBR4-211ENST00000467272 LY6G6EA0A0G2JKS1 128 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 A0A1B0GVL5 298 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 SLC7A4O43246 635 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 PLRG1O43660 514 aaKnown RBP12.61□□□□□ -0.39
UBR4-211ENST00000467272 SIGLEC6O43699 453 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 LUC7L3O95232 432 aaKnown RBP12.61□□□□□ -0.39
UBR4-211ENST00000467272 IGLV3-25P01717 112 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 LTFP02788 710 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 VAV1P15498 845 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 NUDT1P36639 197 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 PLK1P53350 603 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 TBX4P57082 545 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 SKOR1P84550 965 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 ECT2LQ008S8 904 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 PKP1Q13835 747 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 ELAVL3Q14576 367 aaKnown RBP12.61□□□□□ -0.39
UBR4-211ENST00000467272 APCDD1Q8J025 514 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 SIX6OS1Q8N1H7 587 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 STK40Q8N2I9 435 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 DQX1Q8TE96 717 aaKnown RBP12.61□□□□□ -0.39
UBR4-211ENST00000467272 ALG14Q96F25 216 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 OMDQ99983 421 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 XPO7Q9UIA9 1087 aaKnown RBP12.61□□□□□ -0.39
UBR4-211ENST00000467272 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 MAPK8IP1Q9UQF2 711 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 DMTF1Q9Y222 760 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 TLR6Q9Y2C9 796 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 U3KQA8 63 aa12.61□□□□□ -0.39
UBR4-211ENST00000467272 MYLKQ15746 1914 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 CAPN8A6NHC0 703 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 RNF225M0QZC1 329 aaPredicted RBP12.6□□□□□ -0.39
UBR4-211ENST00000467272 CAPN9O14815 690 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 PMM2O15305 246 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 STX10O60499 249 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 RTN2O75298 545 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 MT-CO3P00414 261 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 PAEPP09466 180 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 PSMD8P48556 350 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 TAS2R38P59533 333 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 E2F1Q01094 437 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 DNM1Q05193 864 aaKnown RBP12.6□□□□□ -0.39
UBR4-211ENST00000467272 KCNH2Q12809 1159 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 CNGA2Q16280 664 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 AGBL4Q5VU57 503 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 IGF2-ASQ6U949 168 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 OR14C36Q8NHC7 312 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 GANCQ8TET4 914 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 TTC9Q92623 222 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 SLC35C1Q96A29 364 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 HSFY1Q96LI6 401 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 ZNF578Q96N58 590 aaPredicted RBP12.6□□□□□ -0.39
UBR4-211ENST00000467272 PRMT1Q99873 361 aaKnown RBP12.6□□□□□ -0.39
UBR4-211ENST00000467272 SEMA4CQ9C0C4 833 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 STIM2Q9P246 746 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 HESX1Q9UBX0 185 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 CFAP45Q9UL16 551 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 PPM1HQ9ULR3 514 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 PCDHB1Q9Y5F3 818 aa12.6□□□□□ -0.39
UBR4-211ENST00000467272 A0A1W2PNU3 283 aaPredicted RBP12.59□□□□□ -0.39
UBR4-211ENST00000467272 J3QKU1 62 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 FBXO21O94952 628 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 CKMT1AP12532 417 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 LCP1P13796 627 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 DGKAP23743 735 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 STK19P49842 368 aaPredicted RBP12.59□□□□□ -0.39
UBR4-211ENST00000467272 CCDC173Q0VFZ6 552 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 FOXD4L6Q3SYB3 417 aaPredicted RBP12.59□□□□□ -0.39
UBR4-211ENST00000467272 SLC45A4Q5BKX6 768 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 FOXD4L3Q6VB84 417 aaPredicted RBP12.59□□□□□ -0.39
UBR4-211ENST00000467272 CFAP52Q8N1V2 620 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 CARNMT1Q8N4J0 409 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 ZNF248Q8NDW4 579 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 OR4C6Q8NH72 309 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 SNX21Q969T3 373 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 RPL10LQ96L21 214 aaKnown RBP12.59□□□□□ -0.39
UBR4-211ENST00000467272 SPAG5Q96R06 1193 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 DDX50Q9BQ39 737 aaKnown RBP12.59□□□□□ -0.39
UBR4-211ENST00000467272 ASCL3Q9NQ33 180 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 GPR27Q9NS67 375 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 UCKL1Q9NWZ5 548 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 OR51B4Q9Y5P0 310 aa12.59□□□□□ -0.39
UBR4-211ENST00000467272 TBC1D3DA0A087WVF3 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3IA0A087WXS9 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3EA0A087X179 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3KA0A087X1G2 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3FA6NER0 549 aaPredicted RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 KCNU1A8MYU2 1149 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3LB9A6J9 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 SLC16A3O15427 465 aaKnown RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 ATP9BO43861 1147 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 OPA1O60313 960 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 RNGTTO60942 597 aaKnown RBP12.58□□□□□ -0.4
UBR4-211ENST00000467272 TBC1D3HP0C7X1 549 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 CD19P15391 556 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 LSSP48449 732 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 RGS7P49802 495 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 NDUFA8P51970 172 aa12.58□□□□□ -0.4
UBR4-211ENST00000467272 ERVPABLB-1P60509 514 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms