RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 GJB7Q6PEY0 223 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 INO80CQ6PI98 192 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 ZNF474Q6S9Z5 364 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 DBX2Q6ZNG2 339 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 ADGRG6Q86SQ4 1221 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 LDLRAD3Q86YD5 345 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 FAM47BQ8NA70 645 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 OR52N4Q8NGI2 321 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 RFWD2Q8NHY2 731 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 BCAS4Q8TDM0 211 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 TBC1D22AQ8WUA7 517 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 ZBTB10Q96DT7 871 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 HDHD5Q9BXW7 423 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 INTS2Q9H0H0 1204 aaKnown RBP4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 OSBPL5Q9H0X9 879 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 PDCL3Q9H2J4 239 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 KLK15Q9H2R5 256 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 PRDM13Q9H4Q3 707 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 TERF2IPQ9NYB0 399 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 ARPP21Q9UBL0 812 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 SLC25A10Q9UBX3 287 aaPredicted RBP4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 SWAP70Q9UH65 585 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 OSGIN2Q9Y236 505 aa4.78□□□□□ -1.64
CDC42BPA-211ENST00000466538 KCNJ18B7U540 433 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 TEX22C9J3V5 150 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 RTN3O95197 1032 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 ABCD3P28288 659 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 GJC1P36383 396 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 CCT4P50991 539 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 CDH15P55291 814 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 B4GALNT1Q00973 533 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 BYSLQ13895 437 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 KPNB1Q14974 876 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 PRICKLE4Q2TBC4 344 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 ZNF362Q5T0B9 420 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 C10orf76Q5T2E6 689 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 MZT2BQ6NZ67 158 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 DHRS13Q6UX07 377 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 TBC1D1Q86TI0 1168 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 CHSY1Q86X52 802 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 RHPN2Q8IUC4 686 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 BRSK2Q8IWQ3 736 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 PAQR4Q8N4S7 273 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 NFKBIDQ8NI38 313 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 KAT2BQ92831 832 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 RITA1Q96K30 269 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 C5orf34Q96MH7 638 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 ASB2Q96Q27 587 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 CADM1Q9BY67 442 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 CTDSP1Q9GZU7 261 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 TTC12Q9H892 705 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 VEZTQ9HBM0 779 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 TLR8Q9NR97 1041 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 ASB6Q9NWX5 421 aa4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 FBXO9Q9UK97 447 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 FNDC1Q4ZHG4 1894 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 TDRD9Q8NDG6 1382 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-211ENST00000466538 SYN3O14994 580 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 RNF8O76064 485 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 TBX18O95935 607 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 F9P00740 461 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 CHRM4P08173 479 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 LYL1P12980 280 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 STAT1P42224 750 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 GDF5P43026 501 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 SOX2P48431 317 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 ELLP55199 621 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 TUBA4AP68366 448 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 HSF1Q00613 529 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 PTP4A2Q12974 167 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 NAA25Q14CX7 972 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 SEC23BQ15437 767 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 PROSER3Q2NL68 480 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 PLK5Q496M5 336 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 ZNF766Q5HY98 468 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 PRAMEF17Q5VTA0 474 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 FCRLBQ6BAA4 426 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 ZNF813Q6ZN06 617 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 RBM44Q6ZP01 1051 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 RTL10Q7L3V2 364 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 MDGA2Q7Z553 956 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 AMIGO2Q86SJ2 522 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 VPS52Q8N1B4 723 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 TDRD7Q8NHU6 1098 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 FAM110DQ8TAY7 271 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 ADAMTS15Q8TE58 950 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 ZFPM2Q8WW38 1151 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 PIGKQ92643 395 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 ZNF347Q96SE7 839 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 TMEM248Q9NWD8 314 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 AASSQ9UDR5 926 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 SERGEFQ9UGK8 458 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 TNFSF13BQ9Y275 285 aa4.76□□□□□ -1.65
CDC42BPA-211ENST00000466538 A0A1W2PPH5 198 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 CYR61O00622 381 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 TNPO2O14787 897 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 SPTLC2O15270 562 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 CD63P08962 238 aa4.75□□□□□ -1.65
CDC42BPA-211ENST00000466538 CYP2A6P11509 494 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms