RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 SPATS2Q86XZ4 545 aaKnown RBP13.88□□□□□ -0.19
UBE4B-206ENST00000466379 ZSCAN18Q8TBC5 510 aaPredicted RBP13.88□□□□□ -0.19
UBE4B-206ENST00000466379 DIS3LQ8TF46 1054 aaKnown RBP13.88□□□□□ -0.19
UBE4B-206ENST00000466379 ZNF419Q96HQ0 510 aaPredicted RBP13.88□□□□□ -0.19
UBE4B-206ENST00000466379 TTPALQ9BTX7 342 aa13.88□□□□□ -0.19
UBE4B-206ENST00000466379 MRPL9Q9BYD2 267 aaKnown RBP13.88□□□□□ -0.19
UBE4B-206ENST00000466379 TLR6Q9Y2C9 796 aa13.88□□□□□ -0.19
UBE4B-206ENST00000466379 NYNRINQ9P2P1 1898 aaKnown RBP13.87□□□□□ -0.19
UBE4B-206ENST00000466379 C2CD2LO14523 706 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 AP2A1O95782 977 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 CXCL10P02778 98 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 GSTA2P09210 222 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 HAPLN1P10915 354 aaPredicted RBP13.87□□□□□ -0.19
UBE4B-206ENST00000466379 HOXC13P31276 330 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 SPRED3Q2MJR0 410 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 STEAP4Q687X5 459 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 CGB2Q6NT52 195 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 MSANTD2Q6P1R3 559 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 LRRC43Q8N309 656 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 ATPAF2Q8N5M1 289 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 DPF3Q92784 378 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 SLC39A13Q96H72 371 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 BRD8Q9H0E9 1235 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 CATSPERBQ9H7T0 1116 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 ALG13Q9NP73 1137 aaKnown RBP13.87□□□□□ -0.19
UBE4B-206ENST00000466379 MICAL3Q7RTP6 2002 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 SNX3O60493 162 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 LPXNO60711 386 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 F7P08709 466 aaPredicted RBP13.87□□□□□ -0.19
UBE4B-206ENST00000466379 PGAM1P18669 254 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 SLC18A1P54219 525 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 CRYMQ14894 314 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 C10orf120Q5SQS8 335 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 TFAP2DQ7Z6R9 452 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 OTUD6BQ8N6M0 293 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 SPPL2BQ8TCT7 592 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 THOC1Q96FV9 657 aaKnown RBP13.87□□□□□ -0.19
UBE4B-206ENST00000466379 TEKT5Q96M29 485 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 VN1R3Q9BXE9 311 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 SSU72Q9NP77 194 aaKnown RBP13.87□□□□□ -0.19
UBE4B-206ENST00000466379 SLCO1B3Q9NPD5 702 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.87□□□□□ -0.19
UBE4B-206ENST00000466379 MOCS1Q9NZB8 636 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 IL37Q9NZH6 218 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 GGT7Q9UJ14 662 aa13.87□□□□□ -0.19
UBE4B-206ENST00000466379 GREB1Q4ZG55 1949 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 GOLGA6L7A0A1B0GV03 622 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 FGF10O15520 208 aaPredicted RBP13.86□□□□□ -0.19
UBE4B-206ENST00000466379 MTSS1O43312 755 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 ZWINTO95229 277 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 TPH1P17752 444 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 ATF6P18850 670 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 NUMBP49757 651 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 MLLT6P55198 1093 aaPredicted RBP13.86□□□□□ -0.19
UBE4B-206ENST00000466379 COG7P83436 770 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 SEPT7Q16181 437 aaKnown RBP13.86□□□□□ -0.19
UBE4B-206ENST00000466379 MROH9Q5TGP6 573 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 KCTD11Q693B1 232 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 FAM117BQ6P1L5 589 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 SH2D5Q6ZV89 423 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 ANKRD33Q7Z3H0 272 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 C10orf67Q8IYJ2 551 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 ARHGAP18Q8N392 663 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 DNAAF3Q8N9W5 541 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 SPATA22Q8NHS9 363 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 CCSER2Q9H7U1 834 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 ZNF180Q9UJW8 692 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 GGA2Q9UJY4 613 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 TRHDEQ9UKU6 1024 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 ATP11BQ9Y2G3 1177 aa13.86□□□□□ -0.19
UBE4B-206ENST00000466379 FAM92AA1XBS5 289 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 HMX2A2RU54 273 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 H7C4K7 107 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 MAFKO60675 156 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 CNTN5O94779 1100 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 SUN1O94901 812 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 OAS1P00973 400 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 SNRPAP09012 282 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 CCNB1P14635 433 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 LIG3P49916 1009 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 PAPOLAP51003 745 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ELAVL2Q12926 359 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 PDK4Q16654 411 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 MS4A13Q5J8X5 152 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 CERCAMQ5T4B2 595 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ITPRIPL1Q6GPH6 555 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 CDHR3Q6ZTQ4 885 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ANKS3Q6ZW76 656 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 RTL3Q8N8U3 475 aaKnown RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 FBXO22Q8NEZ5 403 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 APOPT1Q96IL0 206 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 FCRL3Q96P31 734 aaPredicted RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 FAM111AQ96PZ2 611 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 SLC12A8A0AV02 714 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ATP9BO43861 1147 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 KRT37O76014 449 aa13.85□□□□□ -0.19
UBE4B-206ENST00000466379 RTN3O95197 1032 aaPredicted RBP13.85□□□□□ -0.19
UBE4B-206ENST00000466379 ERVK-10P10266 1014 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms