RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 HNRNPCL1O60812 293 aaKnown RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 PDE5AO76074 875 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 HSPA4LO95757 839 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 FGF3P11487 239 aaPredicted RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 WARSP23381 471 aaKnown RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 GP5P40197 560 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 CPT1AP50416 773 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 DAOAP59103 153 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 NIPAL4Q0D2K0 466 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 PCLAFQ15004 111 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 TAF1CQ15572 869 aaPredicted RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 ARL13BQ3SXY8 428 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 PDZD4Q76G19 769 aaPredicted RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 MARK2Q7KZI7 788 aaKnown RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 ANKRD23Q86SG2 305 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 ARHGAP24Q8N264 748 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 TOP6BLQ8N6T0 577 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 C2orf69Q8N8R5 385 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 FAM124BQ9H5Z6 455 aaPredicted RBP16.73■□□□□ 0.27
SLX4-202ENST00000466154 STOML1Q9UBI4 398 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 TAGLN3Q9UI15 199 aa16.73■□□□□ 0.27
SLX4-202ENST00000466154 NVLO15381 856 aaKnown RBP16.72■□□□□ 0.27
SLX4-202ENST00000466154 PHGDHO43175 533 aaKnown RBP16.72■□□□□ 0.27
SLX4-202ENST00000466154 TBX10O75333 385 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 POU6F1Q14863 301 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 TEDDM1Q5T9Z0 273 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 MBLAC2Q68D91 279 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 FSTL4Q6MZW2 842 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 KYAT3Q6YP21 454 aaKnown RBP16.72■□□□□ 0.27
SLX4-202ENST00000466154 ARHGAP36Q6ZRI8 547 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 ZNF354CQ86Y25 554 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 PSTKQ8IV42 348 aaKnown RBP16.72■□□□□ 0.27
SLX4-202ENST00000466154 SCUBE1Q8IWY4 988 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 SCAMP5Q8TAC9 235 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 APBA2Q99767 749 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 COLEC11Q9BWP8 271 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 LRRC40Q9H9A6 602 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 NMRK1Q9NWW6 199 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 PLXNB2O15031 1838 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 A0A096LPK6 155 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 PSMG1O95456 288 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 MT-CYBP00156 380 aaPredicted RBP16.72■□□□□ 0.27
SLX4-202ENST00000466154 CPA3P15088 417 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 GLUD2P49448 558 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 MAP2K5Q13163 448 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 ATG14Q6ZNE5 492 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 IPMKQ8NFU5 416 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 SPDL1Q96EA4 605 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 FAM105AQ9NUU6 356 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 DCDC2Q9UHG0 476 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 SBF1O95248 1867 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 IQCA1LA6NCM1 817 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 DCLK1O15075 740 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 SORBS2O94875 1100 aaKnown RBP16.72■□□□□ 0.27
SLX4-202ENST00000466154 LRIG2O94898 1065 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 PEX19P40855 299 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 CCR10P46092 362 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 DPYSQ14117 519 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 RALGPS1Q5JS13 557 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 C6orf163Q5TEZ5 329 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 SPRYD7Q5W111 196 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 ZMIZ2Q8NF64 920 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 MIEF2Q96C03 454 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 TMEM209Q96SK2 561 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 FIS1Q9Y3D6 152 aa16.72■□□□□ 0.27
SLX4-202ENST00000466154 ZNF638Q14966 1978 aaKnown RBP16.71■□□□□ 0.27
SLX4-202ENST00000466154 MSI1O43347 362 aaKnown RBP16.71■□□□□ 0.27
SLX4-202ENST00000466154 USP1O94782 785 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 KRT72Q14CN4 511 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 KCNMB4Q86W47 210 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 TMPRSS6Q8IU80 811 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 PNPLA1Q8N8W4 532 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 SCG3Q8WXD2 468 aaKnown RBP16.71■□□□□ 0.27
SLX4-202ENST00000466154 MYLPFQ96A32 169 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 COPG2Q9UBF2 871 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 F8W810 466 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 DCXO43602 365 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 ZNF865P0CJ78 1059 aaPredicted RBP16.71■□□□□ 0.27
SLX4-202ENST00000466154 MX2P20592 715 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 NMBRP28336 390 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 ABL2P42684 1182 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 ZNF460Q14592 562 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 RIPOR1Q6ZS17 1223 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 EPAS1Q99814 870 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 WDR6Q9NNW5 1121 aaKnown RBP16.71■□□□□ 0.27
SLX4-202ENST00000466154 SFMBT1Q9UHJ3 866 aa16.71■□□□□ 0.27
SLX4-202ENST00000466154 ARL5CA6NH57 179 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 SNNO75324 88 aaPredicted RBP16.7■□□□□ 0.26
SLX4-202ENST00000466154 SERPINE1P05121 402 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 MLNP12872 115 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 HOXD8P13378 290 aaPredicted RBP16.7■□□□□ 0.26
SLX4-202ENST00000466154 CNTFP26441 200 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 ARRB2P32121 409 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 SPRP35270 261 aaPredicted RBP16.7■□□□□ 0.26
SLX4-202ENST00000466154 SEPT6Q14141 434 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 ANKRD20A4Q4UJ75 823 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 ULK2Q8IYT8 1036 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 SGF29Q96ES7 293 aa16.7■□□□□ 0.26
SLX4-202ENST00000466154 TASP1Q9H6P5 420 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms