RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PPP6R3Q5H9R7 873 aaPredicted RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 SPANXN3Q5MJ09 141 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 CLEC14AQ86T13 490 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 PATL1Q86TB9 770 aaKnown RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 AFG1LQ8WV93 481 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 HTR3CQ8WXA8 447 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 HSPBAP1Q96EW2 488 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 CERS2Q96G23 380 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 RBBP8Q99708 897 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 FAM124BQ9H5Z6 455 aaPredicted RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 NRBP2Q9NSY0 501 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 HMGXB4Q9UGU5 601 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 GTF2IRD1Q9UHL9 959 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 GOLGA8QA0A0J9YX86 632 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 GOLGA8OA6NCC3 632 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 YDJCA8MPS7 323 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 GOLGA8NF8WBI6 632 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 TRIM38O00635 465 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 CBFA2T3O75081 653 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 RNASEH2AO75792 299 aaKnown RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 BMP10O95393 424 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 ENO3P13929 434 aaPredicted RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 MGAT1P26572 445 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 TCF7P36402 384 aaPredicted RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 RPL14P50914 215 aaKnown RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 LIMK2P53671 638 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 CBX3Q13185 183 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 PDK1Q15118 436 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 MPZL3Q6UWV2 235 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 ZBTB8OSQ8IWT0 167 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 TNS4Q8IZW8 715 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 DCLK2Q8N568 766 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 RDH11Q8TC12 318 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 RMND5BQ96G75 393 aaPredicted RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 ZBTB26Q9HCK0 441 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 ZNF358Q9NW07 568 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 HACD3Q9P035 362 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 IGSF9Q9P2J2 1179 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 SIX4Q9UIU6 781 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 KIAA1257Q9ULG3 409 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 PAIP2BQ9ULR5 123 aaKnown RBP20.15■□□□□ 0.82
SDF4-205ENST00000465727 RIPK3Q9Y572 518 aa20.15■□□□□ 0.82
SDF4-205ENST00000465727 IGKV6D-21A0A0A0MT36 114 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 CFLARO15519 480 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 MAFO75444 373 aaPredicted RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 C8BP07358 591 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 ATICP31939 592 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 PSMD8P48556 350 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 CRADDP78560 199 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 STYK1Q6J9G0 422 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 KRT80Q6KB66 452 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 LCLAT1Q6UWP7 414 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 UBA3Q8TBC4 463 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 PIWIL1Q96J94 861 aaKnown RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 HEXIM2Q96MH2 286 aaKnown RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 DRC3Q9H069 523 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 VRTNQ9H8Y1 702 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 OXSMQ9NWU1 459 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 TUBA8Q9NY65 449 aaPredicted RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 UTP6Q9NYH9 597 aaKnown RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 SUCOQ9UBS9 1254 aaKnown RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 MGAMO43451 1857 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 IDO1P14902 403 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 SESN2P58004 480 aaPredicted RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 IKBKEQ14164 716 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 CMC1Q7Z7K0 106 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 ZNF526Q8TF50 670 aaPredicted RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 LRRN4Q8WUT4 740 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 VPS50Q96JG6 964 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 WDR55Q9H6Y2 383 aaPredicted RBP20.14■□□□□ 0.81
SDF4-205ENST00000465727 NMRAL1Q9HBL8 299 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 MRGBPQ9NV56 204 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 CDYLQ9Y232 598 aa20.14■□□□□ 0.81
SDF4-205ENST00000465727 PTPRFP10586 1907 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 FAM155AB1AL88 458 aaPredicted RBP20.13■□□□□ 0.81
SDF4-205ENST00000465727 GRAP2O75791 330 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 EPHA3P29320 983 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 PRKAA1Q13131 559 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 SPIDRQ14159 915 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 FRG1Q14331 258 aaKnown RBP20.13■□□□□ 0.81
SDF4-205ENST00000465727 SLC44A4Q53GD3 710 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 IER5Q5VY09 327 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 RWDD4Q6NW29 188 aaKnown RBP20.13■□□□□ 0.81
SDF4-205ENST00000465727 OLFML1Q6UWY5 402 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 PLD6Q8N2A8 252 aaKnown RBP20.13■□□□□ 0.81
SDF4-205ENST00000465727 RIN3Q8TB24 985 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 USP13Q92995 863 aaPredicted RBP20.13■□□□□ 0.81
SDF4-205ENST00000465727 GATA5Q9BWX5 397 aaPredicted RBP20.13■□□□□ 0.81
SDF4-205ENST00000465727 C2orf40Q9H1Z8 148 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 SLC8A2Q9UPR5 921 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 AP4S1Q9Y587 144 aa20.13■□□□□ 0.81
SDF4-205ENST00000465727 C7orf72A4D263 438 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 TMEM221A6NGB7 291 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 MAGEB3O15480 346 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 DPP6P42658 865 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 OAZ1P54368 228 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 PTK2BQ14289 1009 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 TTC39CQ8N584 583 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 C1orf127Q8N9H9 656 aa20.12■□□□□ 0.81
SDF4-205ENST00000465727 COLGALT1Q8NBJ5 622 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms