RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 PIK3R2O00459 728 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 LUC7L3O95232 432 aaKnown RBP12.18□□□□□ -0.46
CNOT4-208ENST00000465721 LTFP02788 710 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 VDRP11473 427 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 C5AR1P21730 350 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 GLDCP23378 1020 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 ACP1P24666 158 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 RGS7P49802 495 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 STK19P49842 368 aaPredicted RBP12.18□□□□□ -0.46
CNOT4-208ENST00000465721 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 CDH18Q13634 790 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 ELAVL3Q14576 367 aaKnown RBP12.18□□□□□ -0.46
CNOT4-208ENST00000465721 EDRF1Q3B7T1 1238 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 MS4A13Q5J8X5 152 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 PMF1Q6P1K2 205 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 LCLAT1Q6UWP7 414 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 SND1Q7KZF4 910 aaKnown RBP eCLIP12.18□□□□□ -0.46
CNOT4-208ENST00000465721 ZNF605Q86T29 641 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 IQCHQ86VS3 1027 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 STK40Q8N2I9 435 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 CARNMT1Q8N4J0 409 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 MFSD2AQ8NA29 543 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 OR14C36Q8NHC7 312 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 DQX1Q8TE96 717 aaKnown RBP12.18□□□□□ -0.46
CNOT4-208ENST00000465721 SLC35F5Q8WV83 523 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 TFAP2BQ92481 460 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 PTPRN2Q92932 1015 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 ZSWIM1Q9BR11 485 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 ARHGAP20Q9P2F6 1191 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 SLCO3A1Q9UIG8 710 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 CLCA2Q9UQC9 943 aa12.18□□□□□ -0.46
CNOT4-208ENST00000465721 UBR5O95071 2799 aaPredicted RBP12.18□□□□□ -0.46
CNOT4-208ENST00000465721 TYW5A2RUC4 315 aaKnown RBP12.17□□□□□ -0.46
CNOT4-208ENST00000465721 TRIM38O00635 465 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 STX10O60499 249 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 SDC3O75056 442 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 FYNP06241 537 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 EPB41P11171 864 aaKnown RBP12.17□□□□□ -0.46
CNOT4-208ENST00000465721 VAV1P15498 845 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 CMA1P23946 247 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 ACTN2P35609 894 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 CXADRP78310 365 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 ECT2LQ008S8 904 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 NNTQ13423 1086 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 DCAF6Q58WW2 860 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 SLC45A4Q5BKX6 768 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 APCDD1Q8J025 514 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 CFAP52Q8N1V2 620 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 SLC39A13Q96H72 371 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 RPL10LQ96L21 214 aaKnown RBP12.17□□□□□ -0.46
CNOT4-208ENST00000465721 DDX50Q9BQ39 737 aaKnown RBP12.17□□□□□ -0.46
CNOT4-208ENST00000465721 CYTH4Q9UIA0 394 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 XPO7Q9UIA9 1087 aaKnown RBP12.17□□□□□ -0.46
CNOT4-208ENST00000465721 CFAP45Q9UL16 551 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 TLR6Q9Y2C9 796 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 PCDHB1Q9Y5F3 818 aa12.17□□□□□ -0.46
CNOT4-208ENST00000465721 FAM237AA0A1B0GTK4 181 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 CAPN9O14815 690 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 PLRG1O43660 514 aaKnown RBP12.16□□□□□ -0.46
CNOT4-208ENST00000465721 SIGLEC6O43699 453 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 NDUFA8P51970 172 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 YWHAEP62258 255 aaKnown RBP12.16□□□□□ -0.46
CNOT4-208ENST00000465721 CFHR1Q03591 330 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 DCAF17Q5H9S7 520 aaPredicted RBP12.16□□□□□ -0.46
CNOT4-208ENST00000465721 AGBL4Q5VU57 503 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 TAC4Q86UU9 113 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 SMYD4Q8IYR2 804 aaPredicted RBP12.16□□□□□ -0.46
CNOT4-208ENST00000465721 FRS2Q8WU20 508 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
CNOT4-208ENST00000465721 HIC2Q96JB3 615 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 SERPINB11Q96P15 392 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 LGMNQ99538 433 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 KDM4CQ9H3R0 1056 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 FLNCQ14315 2725 aa12.16□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3DA0A087WVF3 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3IA0A087WXS9 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3EA0A087X179 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3KA0A087X1G2 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3FA6NER0 549 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3LB9A6J9 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 M0QYV0 167 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 ERVH48-1M5A8F1 160 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 CETN3O15182 167 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 SLC16A3O15427 465 aaKnown RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 SLC7A4O43246 635 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 RTN2O75298 545 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 MOCS3O95396 460 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 MOCS2O96007 188 aaPredicted RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 IL1BP01584 269 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 PAEPP09466 180 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TBC1D3HP0C7X1 549 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 BRD2P25440 801 aaKnown RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 MAT2AP31153 395 aaKnown RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 NUDT1P36639 197 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 SYKP43405 635 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 PCBP4P57723 403 aaKnown RBP12.15□□□□□ -0.46
CNOT4-208ENST00000465721 KCNH2Q12809 1159 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 OVGP1Q12889 678 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 LRMPQ12912 555 aa12.15□□□□□ -0.46
CNOT4-208ENST00000465721 TCERG1LQ5VWI1 586 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms