RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ARL4AP40617 200 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 CXCL12P48061 93 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 VASPP50552 380 aaPredicted RBP17.41■□□□□ 0.38
USP39-211ENST00000465282 SEC13P55735 322 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 PLEKHG6Q3KR16 790 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 PITRM1Q5JRX3 1037 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 TMEM215Q68D42 235 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 C11orf63Q6NUN7 778 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 MAP7D3Q8IWC1 876 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 RTL3Q8N8U3 475 aaKnown RBP17.41■□□□□ 0.38
USP39-211ENST00000465282 IL17RCQ8NAC3 791 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 FAM71BQ8TC56 605 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 UBE2Q2Q8WVN8 375 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 MAGEB5Q9BZ81 275 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 TSGA10Q9BZW7 698 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 THAP10Q9P2Z0 257 aaPredicted RBP17.41■□□□□ 0.38
USP39-211ENST00000465282 FBXO4Q9UKT5 387 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 NEU3Q9UQ49 428 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 ADGRG1Q9Y653 693 aa17.41■□□□□ 0.38
USP39-211ENST00000465282 RCCD1A6NED2 376 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 H3BRJ5 948 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 BUB1BO60566 1050 aaPredicted RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 HOXA6P31267 233 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 CSKP41240 450 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 YBEYP58557 167 aaPredicted RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 CCZ1BP86790 482 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 CCZ1P86791 482 aaPredicted RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 ENPP2Q13822 863 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 PDK2Q15119 407 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 CA9Q16790 459 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 FUT11Q495W5 492 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 PPP6R3Q5H9R7 873 aaPredicted RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 KCNT1Q5JUK3 1230 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 DAB2IPQ5VWQ8 1189 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 ZNF662Q6ZS27 426 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 TFAP2DQ7Z6R9 452 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 CHPFQ8IZ52 775 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 CAMKK1Q8N5S9 505 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 TPCN2Q8NHX9 752 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 HSPH1Q92598 858 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 ALG14Q96F25 216 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 KCTD15Q96SI1 283 aaPredicted RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 C2orf49Q9BVC5 232 aaPredicted RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 LACRTQ9GZZ8 138 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 MUC3BQ9H195 1237 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 MAGEH1Q9H213 219 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 PRMT8Q9NR22 394 aaPredicted RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.4■□□□□ 0.38
USP39-211ENST00000465282 GPATCH2LQ9NWQ4 482 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 INTS6Q9UL03 887 aaKnown RBP17.4■□□□□ 0.38
USP39-211ENST00000465282 OR51B4Q9Y5P0 310 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 ALG6Q9Y672 507 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 NUP205Q92621 2012 aa17.4■□□□□ 0.38
USP39-211ENST00000465282 TMEM110-MUSTN1A8MSY1 372 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 DAPK3O43293 454 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 KLF8O95600 359 aaPredicted RBP17.39■□□□□ 0.37
USP39-211ENST00000465282 PTMAP06454 111 aaKnown RBP17.39■□□□□ 0.37
USP39-211ENST00000465282 CCDC175P0C221 793 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 TCF4P15884 667 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 NNMTP40261 264 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 DGKEP52429 567 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 ECT2LQ008S8 904 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 GNA12Q03113 381 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 SMTNL2Q2TAL5 461 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 RNF219Q5W0B1 726 aaPredicted RBP17.39■□□□□ 0.37
USP39-211ENST00000465282 EGFLAMQ63HQ2 1017 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 RFX8Q6ZV50 586 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 VSIG1Q86XK7 387 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 RHOT1Q8IXI2 618 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 UMODL1-AS1Q8N2C9 162 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 RNF10Q8N5U6 811 aaKnown RBP17.39■□□□□ 0.37
USP39-211ENST00000465282 LZTR1Q8N653 840 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 ALLCQ8N6M5 410 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 TXNDC5Q8NBS9 432 aaKnown RBP17.39■□□□□ 0.37
USP39-211ENST00000465282 GABRG3Q99928 467 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 DESI2Q9BSY9 194 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 FAM126AQ9BYI3 521 aaPredicted RBP17.39■□□□□ 0.37
USP39-211ENST00000465282 IRF2BPLQ9H1B7 796 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 CWC15Q9P013 229 aaKnown RBP17.39■□□□□ 0.37
USP39-211ENST00000465282 VPS28Q9UK41 221 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 HCN2Q9UL51 889 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 TFR2Q9UP52 801 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 SLC8A2Q9UPR5 921 aa17.39■□□□□ 0.37
USP39-211ENST00000465282 WDFY4Q6ZS81 3184 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 CKAP5Q14008 2032 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 ZNF487B1APH4 448 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 KRT86O43790 486 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 SPOPO43791 374 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 GOT1P17174 413 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 COMTP21964 271 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 MZF1P28698 734 aaPredicted RBP17.38■□□□□ 0.37
USP39-211ENST00000465282 NDST2P52849 883 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 NRLP54845 237 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 NAP1L1P55209 391 aaKnown RBP17.38■□□□□ 0.37
USP39-211ENST00000465282 TAS2R40P59535 323 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 ST8SIA6P61647 398 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 KRT81Q14533 505 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 ZNF234Q14588 700 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 CRY1Q16526 586 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms