RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-223	ENST00000465278	TCEA3	O75764	348 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PDE8B	O95263	885 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TTLL1	O95922	423 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ONECUT2	O95948	504 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	EBLN1	P0CF75	366 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CYP19A1	P11511	503 aa	Predicted RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	NDUFB7	P17568	137 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PDIA3	P30101	505 aa	Known RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ACVRL1	P37023	503 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	RARRES1	P49788	294 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SIM1	P81133	766 aa	Predicted RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ICA1	Q05084	483 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GALNT1	Q10472	559 aa	Predicted RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SPARCL1	Q14515	664 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	HSP90AB4P	Q58FF6	505 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PLAC9	Q5JTB6	97 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TEDDM1	Q5T9Z0	273 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ABLIM2	Q6H8Q1	611 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MRNIP	Q6NTE8	343 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ERAP2	Q6P179	960 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	USP51	Q70EK9	711 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PARS2	Q7L3T8	475 aa	Known RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZNF551	Q7Z340	670 aa	Predicted RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SUGP1	Q8IWZ8	645 aa	Known RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	DNAJC10	Q8IXB1	793 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ABHD5	Q8WTS1	349 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CLMN	Q96JQ2	1002 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PRR25	Q96S07	402 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PRPF18	Q99633	342 aa	Known RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	NECTIN3	Q9NQS3	549 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LRFN1	Q9P244	771 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PRDM4	Q9UKN5	801 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PACSIN3	Q9UKS6	424 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	RIMKLB	Q9ULI2	386 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PLXNB2	O15031	1838 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ABCA12	Q86UK0	2595 aa		5.68	□□□□□ -1.5
CACNA1C-223	ENST00000465278	FANCM	Q8IYD8	2048 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	KRTAP4-8	A0A0G2JLE6	195 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GOLGA6L3	A6NEY3	463 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CES2	O00748	559 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PMPCB	O75439	489 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	URI1	O94763	535 aa	Predicted RBP	5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	NXPH3	O95157	252 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TNFRSF6B	O95407	300 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CREB1	P16220	341 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MST1	P26927	711 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CXCR5	P32302	372 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GDF5	P43026	501 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	E2F1	Q01094	437 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CYP1B1	Q16678	543 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SLC5A9	Q2M3M2	681 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZACN	Q401N2	412 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CRY2	Q49AN0	593 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	L1TD1	Q5T7N2	865 aa	Known RBP	5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TMED8	Q6PL24	325 aa	Predicted RBP	5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278		Q6ZWC4	215 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	RASGRP3	Q8IV61	690 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MYCT1	Q8N699	235 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SPATA18	Q8TC71	538 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZNF384	Q8TF68	577 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZDHHC12	Q96GR4	267 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PDLIM2	Q96JY6	352 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZNF668	Q96K58	619 aa	Predicted RBP	5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TOR3A	Q9H497	397 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GABRQ	Q9UN88	632 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LAS1L	Q9Y4W2	734 aa	Known RBP	5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ARAP2	Q8WZ64	1704 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TEX15	Q9BXT5	2789 aa		5.67	□□□□□ -1.5
CACNA1C-223	ENST00000465278		A0A087X1B8	175 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	QSOX1	O00391	747 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MGST3	O14880	152 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ANP32C	O43423	234 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SKAP2	O75563	359 aa	Predicted RBP	5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	CSTB	P04080	98 aa	Known RBP	5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	RBL1	P28749	1068 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PCSK6	P29122	969 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	GK	P32189	559 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PBX1	P40424	430 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	TBC1D25	Q3MII6	688 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	PCID2	Q5JVF3	399 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ANO1	Q5XXA6	986 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	C17orf99	Q6UX52	265 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	KRT73	Q86Y46	540 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LDLRAD3	Q86YD5	345 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	RAB11FIP4	Q86YS3	637 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	KIAA2013	Q8IYS2	634 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SIRT6	Q8N6T7	355 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SLC16A11	Q8NCK7	471 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SUN3	Q8TAQ9	357 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	BAD	Q92934	168 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	LENG8	Q96PV6	779 aa	Predicted RBP	5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	ZCCHC17	Q9NP64	241 aa	Known RBP	5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	DUSP22	Q9NRW4	184 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MGAT4C	Q9UBM8	478 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	DTNA	Q9Y4J8	743 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	HECTD1	Q9ULT8	2610 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	SH3TC1	Q8TE82	1336 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	RTL9	Q8NET4	1388 aa		5.66	□□□□□ -1.5
CACNA1C-223	ENST00000465278	MYO9A	B2RTY4	2548 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms