RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 TTC27Q6P3X3 843 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 SPOCD1Q6ZMY3 1216 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 RFX8Q6ZV50 586 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 VSIG1Q86XK7 387 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 GOLGA6L1Q8N7Z2 621 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 FAF2Q96CS3 445 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 ZFYVE19Q96K21 471 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 PRICKLE1Q96MT3 831 aaPredicted RBP17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 RPRD1AQ96P16 312 aaPredicted RBP17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 FAM83CQ9BQN1 747 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 ZNF670Q9BS34 389 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 RCOR3Q9P2K3 495 aaPredicted RBP17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 THEGQ9P2T0 379 aa17.41■□□□□ 0.38
EXOSC3-203ENST00000465229 GOLGA8KD6RF30 607 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 H3BRJ5 948 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 RNF40O75150 1001 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 EPHB2P29323 1055 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 HOXC13P31276 330 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 SGSHP51688 502 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 TPI1P60174 286 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 RPS24P62847 133 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 EML3Q32P44 896 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 ANKRD20A8PQ5CZ79 823 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 TRIM68Q6AZZ1 485 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 RWDD4Q6NW29 188 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 LRIG3Q6UXM1 1119 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 TMEM25Q86YD3 366 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 CCDC50Q8IVM0 306 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 CFAP52Q8N1V2 620 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 PCDH19Q8TAB3 1148 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 DEPDC1BQ8WUY9 529 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 EXOC4Q96A65 974 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 TBC1D31Q96DN5 1066 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 TMA16Q96EY4 203 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 RNF157Q96PX1 679 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 RUFY1Q96T51 708 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 TRIM51Q9BSJ1 452 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 ZDHHC18Q9NUE0 388 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 PSD3Q9NYI0 1048 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 MPP6Q9NZW5 540 aa17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 PPARGC1AQ9UBK2 798 aaKnown RBP17.4■□□□□ 0.38
EXOSC3-203ENST00000465229 ZNF487B1APH4 448 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 CNTN5O94779 1100 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 KRT10P13645 584 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 AMPD1P23109 780 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 HTR7P34969 479 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 IFNAR2P48551 515 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 DPYSQ14117 519 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 AAK1Q2M2I8 961 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 ALFQ53S48 1182 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 TFDP3Q5H9I0 405 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 RHBDF2Q6PJF5 856 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 TPGS1Q6ZTW0 290 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 CCDC105Q8IYK2 499 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 GRK7Q8WTQ7 553 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 IRF7Q92985 503 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 TRMT61BQ9BVS5 477 aaKnown RBP17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 OSBPL8Q9BZF1 889 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 NEUROG2Q9H2A3 272 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 KCNK12Q9HB15 430 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 ARHGEF4Q9NR80 690 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 SPHK2Q9NRA0 654 aa17.39■□□□□ 0.38
EXOSC3-203ENST00000465229 hCG_1818297A0A087WSY0 165 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 LOC730098B7Z3J9 87 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 ECEL1O95672 775 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 ARSAP15289 507 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 ADCY2Q08462 1091 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 CCNG2Q16589 344 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 RABGAP1LQ5R372 815 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 LY6G5CQ5SRR4 150 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 CIR1Q86X95 450 aaPredicted RBP17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 YAF2Q8IY57 180 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 PQLC3Q8N755 202 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 NXPE3Q969Y0 559 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 ZIM3Q96PE6 472 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 FMO2Q99518 471 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 HERPUD2Q9BSE4 406 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 HEMGNQ9BXL5 484 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 ZYG11BQ9C0D3 744 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 DPH5Q9H2P9 285 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 VPS18Q9P253 973 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 ADAM21Q9UKJ8 722 aa17.39■□□□□ 0.37
EXOSC3-203ENST00000465229 CHADO15335 359 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 TBL1XO60907 577 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 RHOQP17081 205 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 ERCC2P18074 760 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 GDI1P31150 447 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 TNK2Q07912 1038 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 PDGFRLQ15198 375 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 DHCR24Q15392 516 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 MPPE1Q53F39 396 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 FYB2Q5VWT5 728 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 KAZNQ674X7 775 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 NLRP14Q86W24 1093 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 HJURPQ8NCD3 748 aaPredicted RBP17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 DDI1Q8WTU0 396 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 BHMTQ93088 406 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 TXLNGYQ9BZA5 131 aa17.38■□□□□ 0.37
EXOSC3-203ENST00000465229 HPS4Q9NQG7 708 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms