RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 PKP1Q13835 747 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 KCNB1Q14721 858 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 PON2Q15165 354 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 PDGFRLQ15198 375 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 SURF1Q15526 300 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 MAPRE1Q15691 268 aaKnown RBP6.18□□□□□ -1.42
SSBP1-204ENST00000465167 SEPT7Q16181 437 aaKnown RBP6.18□□□□□ -1.42
SSBP1-204ENST00000465167 TTC31Q49AM3 519 aaPredicted RBP6.18□□□□□ -1.42
SSBP1-204ENST00000465167 AASDHQ4L235 1098 aaPredicted RBP6.18□□□□□ -1.42
SSBP1-204ENST00000465167 ZC2HC1CQ53FD0 456 aaPredicted RBP6.18□□□□□ -1.42
SSBP1-204ENST00000465167 STXBP5Q5T5C0 1151 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 PIK3R6Q5UE93 754 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 WSCD1Q658N2 575 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 IL31Q6EBC2 164 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 SARM1Q6SZW1 724 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 C4orf50Q6ZRC1 276 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 GAREM2Q75VX8 874 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 DDX42Q86XP3 938 aaKnown RBP eCLIP6.18□□□□□ -1.42
SSBP1-204ENST00000465167 CMTM8Q8IZV2 173 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 CPA6Q8N4T0 437 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 CSGALNACT2Q8N6G5 542 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 TTC9BQ8N6N2 239 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 LRRC52Q8N7C0 313 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 MAB21L3Q8N8X9 362 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 OR10T2Q8NGX3 314 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 TTC8Q8TAM2 541 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 SPATA18Q8TC71 538 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 CHAMP1Q96JM3 812 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 ZFYVE19Q96K21 471 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 TMEM209Q96SK2 561 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 PI4K2AQ9BTU6 479 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 NUP62CLQ9H1M0 184 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 ST6GALNAC4Q9H4F1 302 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 TRPC7Q9HCX4 862 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 PRDM7Q9NQW5 492 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 PANK4Q9NVE7 773 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 DDX43Q9NXZ2 648 aaKnown RBP6.18□□□□□ -1.42
SSBP1-204ENST00000465167 DLL3Q9NYJ7 618 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 GTSE1Q9NYZ3 720 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 TBC1D7Q9P0N9 293 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 GULP1Q9UBP9 304 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 ADGRE2Q9UHX3 823 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 AGAP1Q9UPQ3 857 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 DENND4CQ5VZ89 1909 aa6.18□□□□□ -1.42
SSBP1-204ENST00000465167 PTPRZ1P23471 2315 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 MED19A0JLT2 244 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ANKRD63C9JTQ0 380 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 GOLGA6L19H0YKK7 550 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 H7BY64 318 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 PPEF2O14830 753 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 EXTL3O43909 919 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 FAM189A1O60320 539 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 PRPF6O94906 941 aaKnown RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 PAPSS2O95340 614 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ITGB3P05106 788 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 GRK2P25098 689 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 GRK3P35626 688 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 LHX1P48742 406 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ZNF75DP51815 510 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 CORO7P57737 925 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 RBP5P82980 135 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 CEBPZQ03701 1054 aaKnown RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 RUNX3Q13761 415 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 STK38Q15208 465 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 DHCR24Q15392 516 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ELF2Q15723 593 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 HSF5Q4G112 596 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 FBXO43Q4G163 708 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 SLC39A4Q6P5W5 647 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 FBXO38Q6PIJ6 1188 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 SLC23A3Q6PIS1 610 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 CEP128Q6ZU80 1094 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ZNF720Q7Z2F6 126 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 WDR5BQ86VZ2 330 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 KIF18BQ86Y91 864 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 BRSK2Q8IWQ3 736 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 SCN4BQ8IWT1 228 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ADGRF2Q8IZF7 708 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 Q8N1Y9 231 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 GPD1LQ8N335 351 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ANKS4BQ8N8V4 417 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 CCDC150Q8NCX0 1101 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 NELL1Q92832 810 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ATP2A3Q93084 1043 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 FBXW5Q969U6 566 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 SAAL1Q96ER3 474 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 EPSTI1Q96J88 318 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 FNBP1Q96RU3 617 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 MMS19Q96T76 1030 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ACBD6Q9BR61 282 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 ZSCAN16Q9H4T2 348 aaPredicted RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 L2HGDHQ9H9P8 463 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 KIAA1586Q9HCI6 787 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 OLFML3Q9NRN5 406 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 GKN1Q9NS71 199 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 RBM12Q9NTZ6 932 aaKnown RBP6.17□□□□□ -1.42
SSBP1-204ENST00000465167 TDP1Q9NUW8 608 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 IMPACTQ9P2X3 320 aa6.17□□□□□ -1.42
SSBP1-204ENST00000465167 RSPH14Q9UHP6 348 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms