RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 EBF2Q9HAK2 575 aa23.5■■□□□ 1.35
USP42-205ENST00000465073 AASDHPPTQ9NRN7 309 aa23.5■■□□□ 1.35
USP42-205ENST00000465073 DKK4Q9UBT3 224 aa23.5■■□□□ 1.35
USP42-205ENST00000465073 GLI1P08151 1106 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 ABCB4P21439 1286 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 CD38P28907 300 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 PLK1P53350 603 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 IL9RQ01113 521 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 RABGAP1LQ5R372 815 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 OR14C36Q8NHC7 312 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 FAM204AQ9H8W3 233 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 ACP6Q9NPH0 428 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 FTSJ1Q9UET6 329 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 ACACAQ13085 2346 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 PTPRBP23467 1997 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 WNT1P04628 370 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 HOXB3P14651 431 aaPredicted RBP23.49■■□□□ 1.35
USP42-205ENST00000465073 MZF1P28698 734 aaPredicted RBP23.49■■□□□ 1.35
USP42-205ENST00000465073 CCR1P32246 355 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 STK19P49842 368 aaPredicted RBP23.49■■□□□ 1.35
USP42-205ENST00000465073 ADPRHP54922 357 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 PITX1P78337 314 aaPredicted RBP23.49■■□□□ 1.35
USP42-205ENST00000465073 TAF5Q15542 800 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 SMAD1Q15797 465 aaKnown RBP23.49■■□□□ 1.35
USP42-205ENST00000465073 TRIM65Q6PJ69 517 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 PPP1R9BQ96SB3 815 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 CRACR2AQ9BSW2 395 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 ASNSD1Q9NWL6 643 aa23.49■■□□□ 1.35
USP42-205ENST00000465073 APC2O95996 2303 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 A0A1B0GVM2 712 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 TCAF2A6NFQ2 919 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 YKT6O15498 198 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 IL1BP01584 269 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 PDGFRAP16234 1089 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 MTA1Q13330 715 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 EFHC1Q5JVL4 640 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 RNF34Q969K3 372 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 SLC2A13Q96QE2 648 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 SPAG5Q96R06 1193 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 DDIT4Q9NX09 232 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 ITPR1Q14643 2758 aa23.48■■□□□ 1.35
USP42-205ENST00000465073 TMEM131Q92545 1883 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 A0A1W2PR77 199 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 BECN2A8MW95 431 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 USP8P40818 1118 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 VASPP50552 380 aaPredicted RBP23.47■■□□□ 1.35
USP42-205ENST00000465073 CCDC157Q569K6 752 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 SLC45A4Q5BKX6 768 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 PRAMEF14Q5SWL7 426 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 SMYD5Q6GMV2 418 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 GJB7Q6PEY0 223 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 C19orf48Q6RUI8 117 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 DSG4Q86SJ6 1040 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 DEFB106AQ8N104 65 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 WDTC1Q8N5D0 677 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 FRS2Q8WU20 508 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 SERAC1Q96JX3 654 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 PPP1R13BQ96KQ4 1090 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 KDM4CQ9H3R0 1056 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 GDF3Q9NR23 364 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 NBEAQ8NFP9 2946 aa23.47■■□□□ 1.35
USP42-205ENST00000465073 TRABD2BA6NFA1 517 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 LATO43561 262 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 HSF2BPO75031 334 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 ARHGAP44Q17R89 818 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 CXorf57Q6NSI4 855 aaKnown RBP23.46■■□□□ 1.35
USP42-205ENST00000465073 FBXL22Q6P050 247 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.46■■□□□ 1.35
USP42-205ENST00000465073 CIR1Q86X95 450 aaPredicted RBP23.46■■□□□ 1.35
USP42-205ENST00000465073 MARCH9Q86YJ5 346 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 GATAD2AQ86YP4 633 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 CPXM1Q96SM3 734 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 APEX2Q9UBZ4 518 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 RWDD2AQ9UIY3 292 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 RAXQ9Y2V3 346 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 PCDHGA1Q9Y5H4 931 aa23.46■■□□□ 1.35
USP42-205ENST00000465073 GOLGA4Q13439 2230 aaKnown RBP23.45■■□□□ 1.35
USP42-205ENST00000465073 TBC1D3DA0A087WVF3 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3IA0A087WXS9 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3EA0A087X179 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3KA0A087X1G2 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3FA6NER0 549 aaPredicted RBP23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3LB9A6J9 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 WNT9AO14904 365 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 ITGAVP06756 1048 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3HP0C7X1 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 VAV1P15498 845 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 SLC9A1P19634 815 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 DRD3P35462 400 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 CAMK2BQ13554 666 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 COL9A2Q14055 689 aaPredicted RBP23.45■■□□□ 1.34
USP42-205ENST00000465073 SHBQ15464 509 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3GQ6DHY5 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3CQ6IPX1 549 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 DHRS13Q6UX07 377 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 GBP6Q6ZN66 633 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 TBC1D3Q8IZP1 549 aaPredicted RBP23.45■■□□□ 1.34
USP42-205ENST00000465073 PDCD7Q8N8D1 485 aaKnown RBP23.45■■□□□ 1.34
USP42-205ENST00000465073 SAP25Q8TEE9 199 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 SHC3Q92529 594 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms