RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 SLC17A7Q9P2U7 560 aa12.43□□□□□ -0.42
SEC61A1-203ENST00000464451 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.43□□□□□ -0.42
SEC61A1-203ENST00000464451 PDCD11Q14690 1871 aaKnown RBP12.43□□□□□ -0.42
SEC61A1-203ENST00000464451 COL6A3P12111 3177 aa12.43□□□□□ -0.42
SEC61A1-203ENST00000464451 SF3B1O75533 1304 aaKnown RBP eCLIP12.43□□□□□ -0.422e-7■■■■■ 70.2
SEC61A1-203ENST00000464451 CLDN5O00501 218 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ZNF189O75820 626 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 KRT38O76015 456 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 BEST1O76090 585 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 FBXO21O94952 628 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 UNC5CO95185 931 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 TROVE2P10155 538 aaKnown RBP eCLIP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 CTSAP10619 480 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MLNP12872 115 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 RPL17P18621 184 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 POU3F3P20264 500 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ACAT1P24752 427 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ETV4P43268 484 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 LHX1P48742 406 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 RIPK1Q13546 671 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MDH1BQ5I0G3 518 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ANKRD20A2Q5SQ80 823 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 FAM182AQ5T1J6 154 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ANKRD20A1Q5TYW2 823 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ANKRD20A3Q5VUR7 823 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 CYS1Q717R9 158 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ZNF534Q76KX8 674 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MRPL43Q8N983 215 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 RNF139Q8WU17 664 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 C10orf82Q8WW14 230 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 NDRG1Q92597 394 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MTBPQ96DY7 904 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 SLC2A13Q96QE2 648 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MED10Q9BTT4 135 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 IQCGQ9H095 443 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 NSUN3Q9H649 340 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 PLAC1Q9HBJ0 212 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 PRDM6Q9NQX0 595 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ARHGEF3Q9NR81 526 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 LMCD1Q9NZU5 365 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 TIMM13Q9Y5L4 95 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MAD1L1Q9Y6D9 718 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ATG2AQ2TAZ0 1938 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 PRRC2BQ5JSZ5 2229 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 WDR91A4D1P6 747 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 C2orf71A6NGG8 1288 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 TRIM49D1C9J1S8 452 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 M0QYT0 321 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 COPEO14579 308 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 LINC01565O15544 149 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 OPHN1O60890 802 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 EFEMP2O95967 443 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 URODP06132 367 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 GLUD2P49448 558 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 TKTL1P51854 596 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 AIF1P55008 147 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 HYAL1Q12794 435 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 PDK1Q15118 436 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 PRKD1Q15139 912 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 USP41Q3LFD5 358 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 SPDYAQ5MJ70 313 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 OTUD1Q5VV17 481 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ASRGL1Q7L266 308 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 RNF168Q8IYW5 571 aaPredicted RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 CCDC33Q8N5R6 958 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 ERP27Q96DN0 273 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 THOC1Q96FV9 657 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 SENP8Q96LD8 212 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 HERC2P3Q9BVR0 1158 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MYLK2Q9H1R3 596 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 TLE6Q9H808 572 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 EIF2B3Q9NR50 452 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MRPL17Q9NRX2 175 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 KRT82Q9NSB4 513 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 DDX43Q9NXZ2 648 aaKnown RBP12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 CHKBQ9Y259 395 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 MFHAS1Q9Y4C4 1052 aa12.42□□□□□ -0.42
SEC61A1-203ENST00000464451 XIRP2A4UGR9 3374 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 CARNS1A5YM72 827 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 FAM159BA6NKW6 160 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 CXorf49A8MYA2 514 aaPredicted RBP12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 TMEM189-UBE2V1I3L0A0 370 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 MFSD11O43934 449 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 VAV1P15498 845 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 NDUFV1P49821 464 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 MAP3K7CLP57077 242 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 KCNJ2P63252 427 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 DEUP1Q05D60 604 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 SWT1Q5T5J6 900 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 KIAA0319Q5VV43 1072 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 DSTYKQ6XUX3 929 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 DENND5BQ6ZUT9 1274 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 FAM111AQ96PZ2 611 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 LGMNQ99538 433 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 CRTAC1Q9NQ79 661 aa12.41□□□□□ -0.42
SEC61A1-203ENST00000464451 CAPN9O14815 690 aa12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 HGSO14964 777 aaPredicted RBP12.4□□□□□ -0.42
SEC61A1-203ENST00000464451 PPP1R12AO14974 1030 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms