RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 SPTLC3Q9NUV7 552 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 MPP6Q9NZW5 540 aa17.54■□□□□ 0.4
VPS52-215ENST00000464425 EPN1Q9Y6I3 576 aaPredicted RBP17.54■□□□□ 0.4
VPS52-215ENST00000464425 EP300Q09472 2414 aaPredicted RBP17.53■□□□□ 0.4
VPS52-215ENST00000464425 DRGXA6NNA5 263 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 CLDN11O75508 207 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 NDUFV2P19404 249 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 GALCP54803 685 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 CDH4P55283 916 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 PLEKHG6Q3KR16 790 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 TFAP2DQ7Z6R9 452 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 LRRC8AQ8IWT6 810 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 DCLK2Q8N568 766 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 FRMD1Q8N878 549 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 CCDC112Q8NEF3 446 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 OR52K2Q8NGK3 314 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 TRIM7Q9C029 511 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 TMEM245Q9H330 911 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 MRPL47Q9HD33 250 aaKnown RBP17.53■□□□□ 0.4
VPS52-215ENST00000464425 NCDNQ9UBB6 729 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 INTUQ9ULD6 942 aa17.53■□□□□ 0.4
VPS52-215ENST00000464425 SOWAHDA6NJG2 315 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 NDUFA10O95299 355 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 H2AFZP0C0S5 128 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 PSMA2P25787 234 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 ARTNQ5T4W7 220 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 ACBD5Q5T8D3 534 aaPredicted RBP17.52■□□□□ 0.4
VPS52-215ENST00000464425 RNF219Q5W0B1 726 aaPredicted RBP17.52■□□□□ 0.4
VPS52-215ENST00000464425 H2AFVQ71UI9 128 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 FAM160A2Q8N612 972 aaPredicted RBP17.52■□□□□ 0.4
VPS52-215ENST00000464425 MRGPRX1Q96LB2 322 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 THAP2Q9H0W7 228 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 MTG2Q9H4K7 406 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 OR12D3Q9UGF7 316 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 ERVW-1Q9UQF0 538 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 SCINQ9Y6U3 715 aa17.52■□□□□ 0.4
VPS52-215ENST00000464425 FAM186AA6NE01 2351 aa17.52■□□□□ 0.39
VPS52-215ENST00000464425 IGLV3-10A0A075B6K4 115 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 TMEM191CA6NGB0 347 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 FAM72CH0Y354 149 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 ASLP04424 464 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 CYP1A2P05177 515 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 BCKDHBP21953 392 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 OXCT1P55809 520 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 ST8SIA6P61647 398 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 ECT2LQ008S8 904 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 SLC12A1Q13621 1099 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 SPA17Q15506 151 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 FAM72AQ5TYM5 149 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 LAIR1Q6GTX8 287 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 FAM72DQ6L9T8 149 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 RWDD4Q6NW29 188 aaKnown RBP17.51■□□□□ 0.39
VPS52-215ENST00000464425 KIAA1324Q6UXG2 1013 aaKnown RBP17.51■□□□□ 0.39
VPS52-215ENST00000464425 RAD9BQ6WBX8 426 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 SLFN11Q7Z7L1 901 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 FAM72BQ86X60 149 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 CACUL1Q86Y37 369 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 TMPRSS6Q8IU80 811 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 CTNNBL1Q8WYA6 563 aaPredicted RBP17.51■□□□□ 0.39
VPS52-215ENST00000464425 RUBCNQ92622 972 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 RPL10LQ96L21 214 aaKnown RBP17.51■□□□□ 0.39
VPS52-215ENST00000464425 MRGPRX3Q96LB0 322 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 FEM1AQ9BSK4 669 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 MKRN2Q9H000 416 aaKnown RBP17.51■□□□□ 0.39
VPS52-215ENST00000464425 MUC3BQ9H195 1237 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 OSBPL2Q9H1P3 480 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 LUC7LQ9NQ29 371 aaKnown RBP17.51■□□□□ 0.39
VPS52-215ENST00000464425 SLCO3A1Q9UIG8 710 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 GMEB2Q9UKD1 530 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 TBC1D30Q9Y2I9 924 aa17.51■□□□□ 0.39
VPS52-215ENST00000464425 OTOGLQ3ZCN5 2332 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 IPO7O95373 1038 aaKnown RBP17.5■□□□□ 0.39
VPS52-215ENST00000464425 RHOCP08134 193 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 TMEM253P0C7T8 217 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 DESP17661 470 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 OR1E1P30953 314 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 STK19P49842 368 aaPredicted RBP17.5■□□□□ 0.39
VPS52-215ENST00000464425 PLK1P53350 603 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 ZNF252P-AS1Q0IIN9 211 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 MAP7D1Q3KQU3 841 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 PLK5Q496M5 336 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 PYROXD2Q8N2H3 581 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 NTAN1Q96AB6 310 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 ALG14Q96F25 216 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 MYO19Q96H55 970 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 SPACA7Q96KW9 195 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 ZYG11BQ9C0D3 744 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 DUSP15Q9H1R2 295 aaPredicted RBP17.5■□□□□ 0.39
VPS52-215ENST00000464425 PRDM16Q9HAZ2 1276 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 PRSS16Q9NQE7 514 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 SUN2Q9UH99 717 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 VPS28Q9UK41 221 aa17.5■□□□□ 0.39
VPS52-215ENST00000464425 EML5Q05BV3 1969 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 TTC34A8MYJ7 566 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 MAP3K13O43283 966 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 NRDCO43847 1150 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 LRIG2O94898 1065 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 SRPRAP08240 638 aaKnown RBP17.49■□□□□ 0.39
VPS52-215ENST00000464425 P2RY2P41231 377 aa17.49■□□□□ 0.39
VPS52-215ENST00000464425 MAGEA1P43355 309 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms