RNA–Protein interactions for RNA: ENST00000463419.1

NIN-208, Transcript of ninein, human

TSL 4

Gene NIN, Length 1,317 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIN-208	ENST00000463419	SLC12A1	Q13621	1099 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	AUH	Q13825	339 aa	Known RBP	13.38	□□□□□ -0.27
NIN-208	ENST00000463419	ARID5B	Q14865	1188 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	C2CD6	Q53TS8	623 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	C9orf64	Q5T6V5	341 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	CXorf57	Q6NSI4	855 aa	Known RBP	13.38	□□□□□ -0.27
NIN-208	ENST00000463419	ERICH1	Q86X53	443 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	XYLT1	Q86Y38	959 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	DEFB124	Q8NES8	71 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	EPS8L1	Q8TE68	723 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	NT5C3B	Q969T7	300 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	RPRD1A	Q96P16	312 aa	Predicted RBP	13.38	□□□□□ -0.27
NIN-208	ENST00000463419	BTBD1	Q9H0C5	482 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	ANLN	Q9NQW6	1124 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.38	□□□□□ -0.27
NIN-208	ENST00000463419	EIF2B4	Q9UI10	523 aa	Known RBP	13.38	□□□□□ -0.27
NIN-208	ENST00000463419	SLCO3A1	Q9UIG8	710 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	VANGL2	Q9ULK5	521 aa		13.38	□□□□□ -0.27
NIN-208	ENST00000463419	CKAP5	Q14008	2032 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	ITIH6	Q6UXX5	1313 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	PCDH15	Q96QU1	1955 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419		I6L893	689 aa	Predicted RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	EPHB6	O15197	1021 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	OPHN1	O60890	802 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	PAGE1	O75459	146 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	GFPT2	O94808	682 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	ADCY5	O95622	1261 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	LSM8	O95777	96 aa	Known RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	SCNN1A	P37088	669 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	CXCR3	P49682	368 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	STK19	P49842	368 aa	Predicted RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	SULT1E1	P49888	294 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	POLR2F	P61218	127 aa	Known RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	NOMO3	P69849	1222 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	ZNF252P-AS1	Q0IIN9	211 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	GRIK2	Q13002	908 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	MTA1	Q13330	715 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	TTC31	Q49AM3	519 aa	Predicted RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	FAM102A	Q5T9C2	384 aa	Predicted RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	RNF219	Q5W0B1	726 aa	Predicted RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	SASS6	Q6UVJ0	657 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	C14orf80	Q86SX3	495 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	PIP4P1	Q86T03	277 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	HDDC3	Q8N4P3	179 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	OR52K2	Q8NGK3	314 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	C1orf216	Q8TAB5	229 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	SLC20A1	Q8WUM9	679 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	CPA5	Q8WXQ8	436 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	PGAP3	Q96FM1	320 aa	Predicted RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	TKTL2	Q9H0I9	626 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	SIK2	Q9H0K1	926 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	PCED1A	Q9H1Q7	454 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	FAM207A	Q9NSI2	230 aa	Predicted RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	DNAAF2	Q9NVR5	837 aa	Known RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	ARHGEF38	Q9NXL2	777 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	RRN3	Q9NYV6	651 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	NOCT	Q9UK39	431 aa	Known RBP	13.37	□□□□□ -0.27
NIN-208	ENST00000463419	ANGPTL2	Q9UKU9	493 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	STAP1	Q9ULZ2	295 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	SLCO1B1	Q9Y6L6	691 aa		13.37	□□□□□ -0.27
NIN-208	ENST00000463419	EDDM13	A0A1B0GTR0	161 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	TARSL2	A2RTX5	802 aa	Known RBP	13.36	□□□□□ -0.27
NIN-208	ENST00000463419	UPK3BL1	B0FP48	263 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	UPK3BL2	E5RIL1	263 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	GOLGA6L22	H0YM25	854 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	GOLGA8S	H3BPF8	625 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	BCAT2	O15382	392 aa	Predicted RBP	13.36	□□□□□ -0.27
NIN-208	ENST00000463419	RNASEH1	O60930	286 aa	Known RBP	13.36	□□□□□ -0.27
NIN-208	ENST00000463419	GJB3	O75712	270 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	SEMA4F	O95754	770 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	TPM2	P07951	284 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	CD59	P13987	128 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	PLK1	P53350	603 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	COPB1	P53618	953 aa	Known RBP	13.36	□□□□□ -0.27
NIN-208	ENST00000463419	JAM2	P57087	298 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	DEUP1	Q05D60	604 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	SLC25A52	Q3SY17	297 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	C5orf22	Q49AR2	442 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	BRMS1L	Q5PSV4	323 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	FKBP15	Q5T1M5	1219 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	TMCO4	Q5TGY1	634 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	NAA35	Q5VZE5	725 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	TRNP1	Q6NT89	227 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	MMAA	Q8IVH4	418 aa	Known RBP	13.36	□□□□□ -0.27
NIN-208	ENST00000463419	SNX19	Q92543	992 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	PTPRN2	Q92932	1015 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	ALG14	Q96F25	216 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	FAM129B	Q96TA1	746 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	TBCB	Q99426	244 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	PABPC3	Q9H361	631 aa	Known RBP	13.36	□□□□□ -0.27
NIN-208	ENST00000463419	SLC32A1	Q9H598	525 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	WDCP	Q9H6R7	721 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	NLRC4	Q9NPP4	1024 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	ANO10	Q9NW15	660 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	SERGEF	Q9UGK8	458 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	LIMA1	Q9UHB6	759 aa	Known RBP	13.36	□□□□□ -0.27
NIN-208	ENST00000463419	TMEM59L	Q9UK28	342 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	SCML1	Q9UN30	329 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	SIK3	Q9Y2K2	1263 aa		13.36	□□□□□ -0.27
NIN-208	ENST00000463419	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.36	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms