RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 KCNK18Q7Z418 384 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 FAM35AQ86V20 835 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 DIS3L2Q8IYB7 885 aaKnown RBP13.88□□□□□ -0.19
C9orf3-211ENST00000463372 CCDC13Q8IYE1 715 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 MYCT1Q8N699 235 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.88□□□□□ -0.19
C9orf3-211ENST00000463372 FAM84AQ96KN4 292 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 FAM213AQ9BRX8 229 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 BOCQ9BWV1 1114 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 SLC29A3Q9BZD2 475 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 B3GNT4Q9C0J1 378 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.88□□□□□ -0.19
C9orf3-211ENST00000463372 GGT7Q9UJ14 662 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 PADI4Q9UM07 663 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 SLC5A6Q9Y289 635 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 MAP4K5Q9Y4K4 846 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 NME7Q9Y5B8 376 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 STYXL1Q9Y6J8 313 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 TRPM6Q9BX84 2022 aa13.88□□□□□ -0.19
C9orf3-211ENST00000463372 TNRC6AQ8NDV7 1962 aaKnown RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 NPHP3-ACAD11A0A0J9YXS1 232 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 TARSL2A2RTX5 802 aaKnown RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 TCP11X1B4DZS4 312 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 K7EM74 188 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 SLC7A4O43246 635 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 PLRG1O43660 514 aaKnown RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 AP1G2O75843 785 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 CDC20Q12834 499 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 ORC2Q13416 577 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 POSTNQ15063 836 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 ESRP1Q6NXG1 681 aaKnown RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 KIAA0907Q7Z7F0 614 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 DCP2Q8IU60 420 aaKnown RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 BRSK2Q8IWQ3 736 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 SLC35F3Q8IY50 421 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 SLC22A18ASQ8N1D0 253 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 LMX1AQ8TE12 382 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 ANKRD36BP1Q96IX9 119 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 LURAP1Q96LR2 239 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 LARP6Q9BRS8 491 aaKnown RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 SRRTQ9BXP5 876 aaKnown RBP13.87□□□□□ -0.19
C9orf3-211ENST00000463372 CDH19Q9H159 772 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 RASAL2Q9UJF2 1139 aa13.87□□□□□ -0.19
C9orf3-211ENST00000463372 EDDM13A0A1B0GTR0 161 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 A0A1W2PQH9 124 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 TACC1O75410 805 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 CSF2P04141 144 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 RPLP0P05388 317 aaKnown RBP13.86□□□□□ -0.19
C9orf3-211ENST00000463372 NME1P15531 152 aaKnown RBP13.86□□□□□ -0.19
C9orf3-211ENST00000463372 PRLRP16471 622 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 ITGB7P26010 798 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 AKT2P31751 481 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 LEPRP48357 1165 aaKnown RBP13.86□□□□□ -0.19
C9orf3-211ENST00000463372 COPB1P53618 953 aaKnown RBP13.86□□□□□ -0.19
C9orf3-211ENST00000463372 ZRSR1Q15695 479 aaKnown RBP13.86□□□□□ -0.19
C9orf3-211ENST00000463372 SYT2Q8N9I0 419 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-211ENST00000463372 MYO19Q96H55 970 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 SLC45A3Q96JT2 553 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 HAPLN3Q96S86 360 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 FAM129BQ96TA1 746 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 KRT82Q9NSB4 513 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 RBAKQ9NYW8 714 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-211ENST00000463372 NAGPAQ9UK23 515 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 ODF2LQ9ULJ1 636 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 SCML2Q9UQR0 700 aa13.86□□□□□ -0.19
C9orf3-211ENST00000463372 DUX1O43812 170 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 FAM13AO94988 1023 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 RALAP11233 206 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 DRD3P35462 400 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 CCL7P80098 99 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 GTF2BQ00403 316 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 ARID5BQ14865 1188 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 SP5Q6BEB4 398 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-211ENST00000463372 Q6ZSR6 202 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 PTAR1Q7Z6K3 402 aaPredicted RBP13.85□□□□□ -0.19
C9orf3-211ENST00000463372 CACNA2D3Q8IZS8 1091 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 STK40Q8N2I9 435 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 FAM174AQ8TBP5 190 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 NOX5Q96PH1 765 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 CDK5RAP1Q96SZ6 601 aaKnown RBP13.85□□□□□ -0.19
C9orf3-211ENST00000463372 CPEB1Q9BZB8 566 aaKnown RBP13.85□□□□□ -0.19
C9orf3-211ENST00000463372 INTS2Q9H0H0 1204 aaKnown RBP13.85□□□□□ -0.19
C9orf3-211ENST00000463372 NMUR1Q9HB89 426 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 PKDREJQ9NTG1 2253 aa13.85□□□□□ -0.19
C9orf3-211ENST00000463372 DCHS2Q6V1P9 2916 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 HEATR9A2RTY3 570 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 A6NNZ2 444 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 DTNBO60941 627 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 PRPF6O94906 941 aaKnown RBP13.84□□□□□ -0.19
C9orf3-211ENST00000463372 TNNC2P02585 160 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 ASLP04424 464 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 FAM163BP0C2L3 166 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 JUNDP17535 347 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 HNRNPA2B1P22626 353 aaKnown RBP13.84□□□□□ -0.19
C9orf3-211ENST00000463372 MZF1P28698 734 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-211ENST00000463372 PSEN1P49768 467 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 CLDN2P57739 230 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 ZNF445P59923 1031 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 EFEMP1Q12805 493 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 OR6B2Q6IFH4 312 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms