RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 INTS6Q9UL03 887 aaKnown RBP13.49□□□□□ -0.25
HDAC1-203ENST00000463172 DNAH14Q0VDD8 3507 aa13.49□□□□□ -0.25
HDAC1-203ENST00000463172 ITIH6Q6UXX5 1313 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 A0A1B0GTW7 788 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 PATE3B3GLJ2 98 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 ADCY5O95622 1261 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 ADH1BP00325 375 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 SERPINC1P01008 464 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 RHOCP08134 193 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 KRT3P12035 628 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 ENGP17813 658 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 FLT3P36888 993 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 RPS14P62263 151 aaKnown RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 ELAVL3Q14576 367 aaKnown RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 CLEC16AQ2KHT3 1053 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 C5orf22Q49AR2 442 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 SETD3Q86TU7 594 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 FAM124AQ86V42 546 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 PHF13Q86YI8 300 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 SLC41A1Q8IVJ1 513 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 DHX40Q8IX18 779 aaKnown RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 APCDD1Q8J025 514 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 IGSF8Q969P0 613 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 MRGPRX3Q96LB0 322 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 CCDC114Q96M63 670 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 CFAP57Q96MR6 1250 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 AGPAT1Q99943 283 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 C2orf49Q9BVC5 232 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 MIR1-1HGQ9H1L0 117 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 RETREG1Q9H6L5 497 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 RTN4Q9NQC3 1192 aaKnown RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 RXFP3Q9NSD7 469 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 TMEM74BQ9NUR3 256 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 TMEM59LQ9UK28 342 aa13.48□□□□□ -0.25
HDAC1-203ENST00000463172 TPX2Q9ULW0 747 aaKnown RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
HDAC1-203ENST00000463172 NYNRINQ9P2P1 1898 aaKnown RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 METTL12A8MUP2 240 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 OPHN1O60890 802 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 SIN3BO75182 1162 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 SEMA4FO95754 770 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 C7P10643 843 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 UNGP13051 313 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 ATP1A3P13637 1013 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 CHRNB2P17787 502 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 TNFAIP3P21580 790 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 MAPK8P45983 427 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 GSCP56915 257 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 ATP11AP98196 1134 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 UAP1L1Q3KQV9 507 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 ACCSLQ4AC99 568 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 DCAF12L1Q5VU92 463 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 FAM46CQ5VWP2 391 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 CXorf57Q6NSI4 855 aaKnown RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 ZNF783Q6ZMS7 281 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 STRADAQ7RTN6 431 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 CIR1Q86X95 450 aaPredicted RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 SLC30A5Q8TAD4 765 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 DNASE2BQ8WZ79 361 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 SNX19Q92543 992 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 RPL10LQ96L21 214 aaKnown RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 OMDQ99983 421 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 FEM1AQ9BSK4 669 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 HSD3B7Q9H2F3 369 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 PABPC3Q9H361 631 aaKnown RBP13.47□□□□□ -0.25
HDAC1-203ENST00000463172 SLC32A1Q9H598 525 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 CD93Q9NPY3 652 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 FBXL12Q9NXK8 326 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 TBC1D30Q9Y2I9 924 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 NCOR2Q9Y618 2525 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 DOCK4Q8N1I0 1966 aa13.47□□□□□ -0.25
HDAC1-203ENST00000463172 A0A1W2PQC6 194 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 LRRC72A6NJI9 287 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 TTC34A8MYJ7 566 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 E9PAM4 449 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 C1QTNF3-AMACRE9PGA6 284 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 ARHGAP33O14559 1287 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 SRGAP2O75044 1071 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 MZF1P28698 734 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-203ENST00000463172 OR1E1P30953 314 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 ETFBP38117 255 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 CTSOP43234 321 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-203ENST00000463172 PTPN9P43378 593 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 C1QBPQ07021 282 aaKnown RBP13.46□□□□□ -0.25
HDAC1-203ENST00000463172 CCDC15Q0P6D6 951 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 TEAD4Q15561 434 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 CST6Q15828 149 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 SKOR2Q2VWA4 1001 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-203ENST00000463172 C9orf64Q5T6V5 341 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 OTUD1Q5VV17 481 aaPredicted RBP13.46□□□□□ -0.25
HDAC1-203ENST00000463172 DNAJC24Q6P3W2 148 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 IL27RAQ6UWB1 636 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 APTXQ7Z2E3 356 aaKnown RBP13.46□□□□□ -0.25
HDAC1-203ENST00000463172 FAM131BQ86XD5 332 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 C3orf20Q8ND61 904 aa13.46□□□□□ -0.25
HDAC1-203ENST00000463172 RXFP2Q8WXD0 754 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms