RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CRELD1Q96HD1 420 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 HSFY1Q96LI6 401 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 PRICKLE1Q96MT3 831 aaPredicted RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 CDC6Q99741 560 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 SLC4A5Q9BY07 1137 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 MTG2Q9H4K7 406 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 LRRC4Q9HBW1 653 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 CNGB3Q9NQW8 809 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 SERGEFQ9UGK8 458 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 GGA2Q9UJY4 613 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 ANKRD6Q9Y2G4 727 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 HBS1LQ9Y450 684 aaKnown RBP8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 PIEZO2Q9H5I5 2752 aa8.22□□□□□ -1.09
CDC42BPA-210ENST00000462553 CHD5Q8TDI0 1954 aa8.21□□□□□ -1.09
CDC42BPA-210ENST00000462553 SYCE3A1L190 88 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM149AA5PLN7 773 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 GOLGA8CPA6NN73 597 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 F8VZ95 297 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 PES1O00541 588 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 KCNK3O14649 394 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 TIMM44O43615 452 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 LATS1O95835 1130 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 FYNP06241 537 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 DLDP09622 509 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 CD27P26842 260 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 CD70P32970 193 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 USP8P40818 1118 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 GRK6P43250 576 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 CCT8P50990 548 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC8A3P57103 927 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZNF445P59923 1031 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 IL9RQ01113 521 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZBTB16Q05516 673 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 PDCLQ13371 301 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 E2F5Q15329 346 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 SYCP1Q15431 976 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 ADGRF1Q5T601 910 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 BSPRYQ5W0U4 402 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 MBLAC2Q68D91 279 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 NADSYN1Q6IA69 706 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 RFWD3Q6PCD5 774 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 PASD1Q8IV76 773 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 AHI1Q8N157 1196 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 SIX6OS1Q8N1H7 587 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 HNRNPLLQ8WVV9 542 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 IRGQQ8WZA9 623 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 MRGPRX3Q96LB0 322 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 ERGIC2Q96RQ1 377 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 BTBD1Q9H0C5 482 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 RSPH9Q9H1X1 276 aaPredicted RBP8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 FBRSQ9HAH7 460 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 EBF2Q9HAK2 575 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 OLA1Q9NTK5 396 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 INTS6Q9UL03 887 aaKnown RBP8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 PCDHGC3Q9UN70 934 aa8.21□□□□□ -1.1
CDC42BPA-210ENST00000462553 MYO18BQ8IUG5 2567 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 A0A087WV48 116 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 A0A1B0GTQ1 180 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 GOLGA6L7A0A1B0GV03 622 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TRABD2BA6NFA1 517 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 E5RJQ4 531 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 CBX4O00257 560 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TEX33O43247 280 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 MED7O43513 233 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TNFSF14O43557 240 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 FBXO21O94952 628 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 FSBPO95073 299 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 LTFP02788 710 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 WNT1P04628 370 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 CDH5P33151 784 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 HARS2P49590 506 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 CLDN6P56747 220 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 ARID5AQ03989 594 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 CYP4F3Q08477 520 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 RAPGEF1Q13905 1077 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 SHBQ15464 509 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TEAD4Q15561 434 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 PTPN20Q4JDL3 420 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 MPP7Q5T2T1 576 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 PIK3R6Q5UE93 754 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 KIAA0895LQ68EN5 471 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TMEM110Q86TL2 294 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 NOP9Q86U38 636 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 SCUBE3Q8IX30 993 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 GALNT15Q8N3T1 639 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 C1orf131Q8NDD1 294 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 EPS8L1Q8TE68 723 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 STK32AQ8WU08 396 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TTC17Q96AE7 1141 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TMA16Q96EY4 203 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 LRIG1Q96JA1 1093 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC6A18Q96N87 628 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 CPXM1Q96SM3 734 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 STK33Q9BYT3 514 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 PABPC3Q9H361 631 aaKnown RBP8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 SGK2Q9HBY8 427 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM207AQ9NSI2 230 aaPredicted RBP8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 TRPM6Q9BX84 2022 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 KIF26BQ2KJY2 2108 aa8.2□□□□□ -1.1
CDC42BPA-210ENST00000462553 NAV2Q8IVL1 2488 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms