RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 ZNF280DQ6N043 979 aa20.7■□□□□ 0.9
CCM2-203ENST00000461377 KLHDC8BQ8IXV7 354 aa20.7■□□□□ 0.9
CCM2-203ENST00000461377 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCM2-203ENST00000461377 MARCH5Q9NX47 278 aa20.7■□□□□ 0.9
CCM2-203ENST00000461377 IL37Q9NZH6 218 aa20.7■□□□□ 0.9
CCM2-203ENST00000461377 PLLPQ9Y342 182 aa20.7■□□□□ 0.9
CCM2-203ENST00000461377 PLXNA3P51805 1871 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.69■□□□□ 0.9
CCM2-203ENST00000461377 ARHGAP42A6NI28 874 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 USP12O75317 370 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 GATMP50440 423 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 PRMT2P55345 433 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 FAM133BQ5BKY9 247 aaKnown RBP20.69■□□□□ 0.9
CCM2-203ENST00000461377 MROH9Q5TGP6 573 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 PACS1Q6VY07 963 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 ARHGAP18Q8N392 663 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 FITM2Q8N6M3 262 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 PTPRN2Q92932 1015 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 GPR62Q9BZJ7 368 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 IQCGQ9H095 443 aaKnown RBP20.69■□□□□ 0.9
CCM2-203ENST00000461377 LRRC40Q9H9A6 602 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 VANGL2Q9ULK5 521 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 HS3ST4Q9Y661 456 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 MYO16Q9Y6X6 1858 aa20.69■□□□□ 0.9
CCM2-203ENST00000461377 DFFAO00273 331 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 CACNG3O60359 315 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 FKTNO75072 461 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 FGFR3P22607 806 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 MAP2K2P36507 400 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 SERPINB4P48594 390 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 USP46P62068 366 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 CCDC15Q0P6D6 951 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 FRG1Q14331 258 aaKnown RBP20.68■□□□□ 0.9
CCM2-203ENST00000461377 ARHGAP36Q6ZRI8 547 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 CEP57Q86XR8 500 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 ATPAF2Q8N5M1 289 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 CNTD1Q8N815 330 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 SLC39A13Q96H72 371 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 PGLYRP2Q96PD5 576 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 BFARQ9NZS9 450 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 SLC17A6Q9P2U8 582 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 TLR6Q9Y2C9 796 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 USH1CQ9Y6N9 552 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 MYO18AQ92614 2054 aaKnown RBP20.68■□□□□ 0.9
CCM2-203ENST00000461377 FAM92AA1XBS5 289 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 SLC11A1P49279 550 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 ARHGEF6Q15052 776 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 TTC31Q49AM3 519 aaPredicted RBP20.68■□□□□ 0.9
CCM2-203ENST00000461377 PACS2Q86VP3 889 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 TTC9BQ8N6N2 239 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 ATAD1Q8NBU5 361 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 C10orf82Q8WW14 230 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 SEPT8Q92599 483 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 ALG13Q9NP73 1137 aaKnown RBP20.68■□□□□ 0.9
CCM2-203ENST00000461377 GMIPQ9P107 970 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 RPS6KL1Q9Y6S9 549 aa20.68■□□□□ 0.9
CCM2-203ENST00000461377 VWA8A3KMH1 1905 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 E9PAM4 449 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 TUBP50607 506 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 PRPSAP1Q14558 356 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 TCTN1Q2MV58 587 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 AFMIDQ63HM1 303 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 FAM43BQ6ZT52 329 aaPredicted RBP20.67■□□□□ 0.9
CCM2-203ENST00000461377 C14orf80Q86SX3 495 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 TMEM135Q86UB9 458 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 ANKLE1Q8NAG6 615 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 ZNF296Q8WUU4 475 aaPredicted RBP20.67■□□□□ 0.9
CCM2-203ENST00000461377 THOC1Q96FV9 657 aaKnown RBP20.67■□□□□ 0.9
CCM2-203ENST00000461377 CERS2Q96G23 380 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 C1orf74Q96LT6 269 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 FCRL3Q96P31 734 aaPredicted RBP20.67■□□□□ 0.9
CCM2-203ENST00000461377 SLC39A8Q9C0K1 460 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 PCMTD2Q9NV79 361 aa20.67■□□□□ 0.9
CCM2-203ENST00000461377 WASH4PA8MWX3 477 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 PITPNM1O00562 1244 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 PSMD3O43242 534 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 MAFKO60675 156 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 MOCS2O96007 188 aaPredicted RBP20.66■□□□□ 0.9
CCM2-203ENST00000461377 CRHR1P34998 444 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 NPY2RP49146 381 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 MLLT6P55198 1093 aaPredicted RBP20.66■□□□□ 0.9
CCM2-203ENST00000461377 BNIP1Q12981 228 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 FBXW10Q5XX13 1052 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 CES3Q6UWW8 571 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 RASSF3Q86WH2 238 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 NDUFAF2Q8N183 169 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 RTL3Q8N8U3 475 aaKnown RBP20.66■□□□□ 0.9
CCM2-203ENST00000461377 DNAAF3Q8N9W5 541 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 B3GALT6Q96L58 329 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 IL12RB2Q99665 862 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 KLF11O14901 512 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 IL1BP01584 269 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 ALDH2P05091 517 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 SLC2A3P11169 496 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 CCNB1P14635 433 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 BGNP21810 368 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 PIK3R6Q5UE93 754 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 FYB2Q5VWT5 728 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 CRIPAKQ8N1N5 446 aa20.66■□□□□ 0.9
CCM2-203ENST00000461377 ZNF398Q8TD17 642 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms