RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 MCM8Q9UJA3 840 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 FBXO10Q9UK96 956 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 ZDHHC9Q9Y397 364 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 LYVE1Q9Y5Y7 322 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 UGGT1Q9NYU2 1555 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 LAMC1P11047 1609 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 TKTL1P51854 596 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 BOP1Q14137 746 aaKnown RBP9.15□□□□□ -0.94
BRCA1-205ENST00000461221 BROXQ5VW32 411 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 DSN1Q9H410 356 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 POMKQ9H5K3 350 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 KANSL3Q9P2N6 904 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 NAALADL1Q9UQQ1 740 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 ANGPT4Q9Y264 503 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 TBC1D30Q9Y2I9 924 aa9.15□□□□□ -0.94
BRCA1-205ENST00000461221 SLC26A2P50443 739 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 RAB27AP51159 221 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 TBX4P57082 545 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 SCARF1Q14162 830 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 POU6F1Q14863 301 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 ACOX1Q15067 660 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 GLT6D1Q7Z4J2 308 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 OR7A2PQ8NGA2 310 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 S100ZQ8WXG8 99 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 FAIM2Q9BWQ8 316 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 C1QTNF1Q9BXJ1 281 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 SLC35C2Q9NQQ7 365 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 GGA3Q9NZ52 723 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 PCDHB12Q9Y5F1 795 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 ZMYM2Q9UBW7 1377 aa9.15□□□□□ -0.95
BRCA1-205ENST00000461221 ANKDD1BA6NHY2 528 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 STX16-NPEPL1H3BU86 382 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 STX16O14662 325 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 CHP2O43745 196 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ICAM1P05362 532 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 TCF4P15884 667 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ITGB6P18564 788 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RASA1P20936 1047 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 DGKAP23743 735 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RPS12P25398 132 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RAB25P57735 213 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 CDK16Q00536 496 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PTPN11Q06124 597 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RBBP4Q09028 425 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 MTAPQ13126 283 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ITGADQ13349 1161 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 KYAT3Q6YP21 454 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RNF44Q7L0R7 432 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 CAPSLQ8WWF8 208 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SPACA7Q96KW9 195 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 TAAR1Q96RJ0 339 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RUSC1Q9BVN2 902 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 CHID1Q9BWS9 393 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 FAM126AQ9BYI3 521 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PTGFRNQ9P2B2 879 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ZNF222Q9UK12 451 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PCDHB5Q9Y5E4 795 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 USP42Q9H9J4 1324 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 HAT1O14929 419 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 MSH4O15457 936 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 RIPK2O43353 540 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 IDH3BO43837 385 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ZBTB7AO95365 584 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 MAP3K6O95382 1288 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SUPT20HL2P0C7V6 817 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 FAM228BP0C875 321 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 POLR2LP62875 67 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 NAIF1Q69YI7 327 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 BHLHB9Q6PI77 547 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SNX32Q86XE0 403 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 COLGALT2Q8IYK4 626 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PJA1Q8NG27 643 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SERPINB11Q96P15 392 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 YME1L1Q96TA2 773 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 HGH1Q9BTY7 390 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 MAP10Q9P2G4 905 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 AXIN2Q9Y2T1 843 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 IRAK3Q9Y616 596 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 A0A096LPK6 155 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 AHCYL1O43865 530 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 MED24O75448 989 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 LYNP07948 512 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ADSSP30520 456 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 SLC26A3P40879 764 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 POLD2P49005 469 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 TNK2Q07912 1038 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 TOMM20Q15388 145 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 C5orf22Q49AR2 442 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 KCTD21Q4G0X4 260 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PYDC2Q56P42 97 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ANKRD13AQ8IZ07 590 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 PCSK9Q8NBP7 692 aaKnown RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ZSCAN18Q8TBC5 510 aaPredicted RBP9.14□□□□□ -0.95
BRCA1-205ENST00000461221 VAT1Q99536 393 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 DGCR6LQ9BY27 220 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 DCLK3Q9C098 648 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 ATP13A1Q9HD20 1204 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 A2ML1A8K2U0 1454 aa9.14□□□□□ -0.95
BRCA1-205ENST00000461221 WDR27A2RRH5 827 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms